Rv3919c - p.Ala138Glu
Drug resistance types
51 Sensitive
3 RR-TB
34 HR-TB
50 MDR-TB
56 Pre-XDR-TB
11 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2.1 | 5 |
| lineage4.4.1.1 | 63 |
| lineage4.9.1 | 3 |
| lineage3.1 | 4 |
| lineage3 | 16 |
| lineage1.2.1.2 | 4 |
| lineage4.1.2.1 | 21 |
| lineage2.2.1 | 15 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 14 |
| lineage1.2.2.2 | 2 |
| lineage4.7 | 7 |
| lineage4.2.2 | 1 |
| lineage1.1.2 | 6 |
| lineage4.3.2.1 | 4 |
| lineage4.1.1 | 2 |
| lineage4.6 | 4 |
| lineage5.1.5 | 1 |
| lineage2.2.1.1 | 5 |
| lineage1.1.3.1;lineage3 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1;lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage4.4.1.1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.8 | 3 |
| lineage4.2.2.2 | 3 |
| lineage4.5 | 1 |
| lineage4.1 | 3 |
| lineage4.1;lineage4.3.2.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 210 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6336808 | HR-TB | lineage1.2.1.2.1 | None | SRR16156744 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29049029 | MDR-TB | lineage4.9.1 | None | ERR294178 | Sensitive | lineage3.1 | None | SRR29049028 | MDR-TB | lineage4.9.1 | None | ERR6052022 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR6964508 | HR-TB | lineage3 | None | SRR16156728 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR718472 | Sensitive | lineage1.2.1.2.1 | th | ERR7911550 | MDR-TB | lineage4.4.1.1 | za | SRR16156735 | MDR-TB | lineage4.4.1.1 | None | ERR351922 | HR-TB | lineage1.2.1.2 | None | SRR2100108 | HR-TB | lineage3 | None | SRR2100981 | Sensitive | lineage3.1 | None | ERR229938 | Other | lineage4.1.2.1 | ru | ERR2517052 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516856 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2516461 | MDR-TB | lineage4.1.2 | nl | ERR4812945 | MDR-TB | lineage4.3.3 | pe | ERR2514385 | Sensitive | lineage1.2.2.2 | gb | ERR4830435 | Sensitive | lineage4.7 | vn | ERR4831455 | MDR-TB | lineage3 | None | SRR5341372 | HR-TB | lineage4.2.2 | in | SRR5341357 | MDR-TB | lineage1.1.2 | in | SRR16156703 | MDR-TB | lineage4.4.1.1 | None | ERR12118001 | MDR-TB | lineage4.3.3 | None | SRR28044714 | Sensitive | lineage3 | None | SAMN02053782 | HR-TB | lineage4.3.2.1 | za | ERR13258407 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081787 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5073855 | Sensitive | lineage4.1.2.1 | vn | ERR9807030 | MDR-TB | lineage4.4.1.1 | None | SRR7070127 | Sensitive | lineage1.2.2.2 | None | ERR4020201 | MDR-TB | lineage4.3.2.1 | None | ERR2600611 | Other | lineage4.1.2.1 | None | ERR4831158 | Other | lineage4.1.2.1 | de | ERR13288800 | XDR-TB | lineage4.4.1.1 | None | ERR9119843 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR8975764 | XDR-TB | lineage4.4.1.1 | None | ERR4024805 | HR-TB | lineage4.1.1 | None | ERR6865319 | HR-TB | lineage4.1.1 | None | ERR11049943 | Sensitive | lineage4.6 | None | ERR11082969 | Sensitive | lineage4.6 | None | SRR16370501 | MDR-TB | lineage4.3.3 | None | ERR6336727 | HR-TB | lineage1.2.1.2.1 | None | ERR1023223 | MDR-TB | lineage5.1.5 | None | SRR29094077 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR26630743 | MDR-TB | lineage2.2.1.1 | None | SRR16156700 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29093498 | MDR-TB | lineage4.4.1.1 | None | ERR13285196 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29096274 | Sensitive | lineage1.1.3.1;lineage3 | None | SRR18213709 | HR-TB | lineage1.2.1.2 | None | SRR29126162 | Sensitive | lineage3 | None | DRR130057 | Pre-XDR-TB | lineage2.2.1 | None | DRR130168 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829614 | Sensitive | lineage4.1.2.1 | None | SRR21732685 | Sensitive | lineage1.2.1.2.1 | None | ERR1035283 | MDR-TB | lineage4.3.3 | br | SRR29093778 | MDR-TB | lineage4.4.1.1 | None | SRR6930910 | MDR-TB | lineage4.1.1.3 | None | ERR1035110 | Sensitive | lineage4.1.2.1 | vn | SRR29126595 | HR-TB | lineage4.9 | None | ERR6362905 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28046065 | HR-TB | lineage3.1.2 | None | ERR1035005 | MDR-TB | lineage4.4.1.1 | za | SRR27450339 | Sensitive | lineage1.2.1.2.1 | None | ERR6866805 | Sensitive | lineage4.1.2.1;lineage4.3.2 | None | ERR4828650 | Sensitive | lineage4.1.2.1 | None | ERR13258463 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801690 | Other | lineage2.2.1;lineage4.8 | None | DRR130171 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096777 | Sensitive | lineage4.1.1.3 | None | SRR28393486 | MDR-TB | lineage4.3.3 | None | SRR26399538 | Sensitive | lineage4.7 | None | ERR7910850 | MDR-TB | lineage4.3.3 | pe | ERR7911634 | Pre-XDR-TB | lineage2.2.1;lineage4.4.1.1 | za | ERR9807015 | HR-TB | lineage4.4.1.1 | None | ERR7911649 | MDR-TB | lineage4.4.1.1 | za | ERR775303 | HR-TB | lineage4.1.2.1 | pe | SRR16156758 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11049942 | Sensitive | lineage4.6 | None | ERR4831533 | HR-TB | lineage4.4.1.1 | None | ERR4831542 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4896317 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4829056 | Sensitive | lineage4.7 | it | ERR4814606 | Sensitive | lineage1.1.3.1 | gb | ERR4815416 | Sensitive | lineage3 | gb | ERR4815525 | Sensitive | lineage3.1 | gb | ERR4817100 | Sensitive | lineage1.1.3.1 | gb | ERR4817640 | Sensitive | lineage4.1.1.3 | gb | ERR4818558 | Sensitive | lineage1.1.3.1 | gb | ERR4818973 | HR-TB | lineage1.1.2 | gb | SRR5341325 | HR-TB | lineage3 | in | ERR9119444 | Sensitive | lineage4.7 | None | SRR16157041 | MDR-TB | lineage4.4.1.1 | None | SRR18911874 | MDR-TB | lineage2.2.1.1 | None | ERR1034763 | Sensitive | lineage4.7 | pe | ERR13266971 | Sensitive | lineage3.1 | None | SRR6785322 | HR-TB | lineage4.8 | None | ERR9807007 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR5987451 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9119797 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR072052 | HR-TB | lineage3 | None | SRR16156714 | MDR-TB | lineage4.4.1.1 | None | ERR4796510 | RR-TB | lineage1.1.2 | in | ERR4799429 | Sensitive | lineage3 | in | ERR5987322 | Pre-XDR-TB | lineage4.4.1.1 | None | DRR130167 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370508 | MDR-TB | lineage4.3.3 | None | ERR1035032 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR13286177 | XDR-TB | lineage4.4.1.1 | None | ERR13289274 | XDR-TB | lineage4.4.1.1 | None | ERR9992749 | XDR-TB | lineage4.4.1.1 | None | ERR13289386 | XDR-TB | lineage4.4.1.1 | None | SRR28045374 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4798784 | Sensitive | lineage3 | in | SRR29093578 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29126834 | Sensitive | lineage4.1.2.1 | None | SRR16156725 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR8025632 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4827729 | RR-TB | lineage4.5 | None | ERR4831541 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR19317576 | HR-TB | lineage4.1.2.1 | None | ERR13292136 | MDR-TB | lineage2.2.1.1 | None | SRR29053313 | HR-TB | lineage4.1.2.1 | None | SRR29096388 | Sensitive | lineage3 | None | ERR1873433 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR24827298 | MDR-TB | lineage2.2.1.1 | None | SRR18213852 | HR-TB | lineage3 | None | SRR14781937 | HR-TB | lineage4.1 | None | SRR30333240 | HR-TB | lineage4.1.2.1 | None | ERR13260904 | HR-TB | lineage4.1;lineage4.3.2.1 | None | DRR130169 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748096 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR16156739 | MDR-TB | lineage4.4.1.1 | None | SRR833167 | HR-TB | lineage4.3.2.1 | None | SRR833184 | HR-TB | lineage4.3.2.1 | None | ERR9806875 | MDR-TB | lineage4.4.1.1 | None | SRR21732370 | Sensitive | lineage1.1.2 | None | ERR2510500 | MDR-TB | lineage3 | pk | SRR29096555 | MDR-TB | lineage4.9.1 | None | ERR9124956 | HR-TB | lineage4.1.3 | None | ERR6397179 | Sensitive | lineage4.2.2.2 | None | ERR6362545 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28393820 | MDR-TB | lineage4.1.2.1;lineage4.4.1.1 | None | ERR7911578 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR22461652 | MDR-TB | lineage4.3.3 | None | SRR2101259 | HR-TB | lineage1.2.1.2 | None | ERR1873449 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR2517001 | MDR-TB | lineage4.1.2.1 | gb | ERR4813086 | MDR-TB | lineage4.3.3 | pe | ERR4812421 | Sensitive | lineage4.1.2.1 | pe | ERR4828990 | RR-TB | lineage4.6.2.2 | None | ERR8975787 | XDR-TB | lineage4.4.1.1 | None | SRR28045381 | MDR-TB | lineage1.1.2 | None | ERR4831544 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR6879038 | Sensitive | lineage4.7 | None | SRR29016935 | Sensitive | lineage4.1.2.1 | None | ERR386854 | HR-TB | lineage1.2.1.2 | None | ERR4796376 | Sensitive | lineage3 | in | SRR5074177 | Sensitive | lineage1.1.1.1 | vn | ERR3470580 | Sensitive | lineage3.1.1 | None | SRR6832361 | Other | lineage4.1.2.1 | None | SRR6832406 | MDR-TB | lineage4.1 | None | SRR5074111 | Sensitive | lineage4.1.2.1 | vn | SRR5074187 | Sensitive | lineage4.1.2.1 | vn | SRR25827875 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3 | None | ERR4813360 | Pre-XDR-TB | lineage4.3.3 | None | ERR1035304 | MDR-TB | lineage4.3.3 | br | SRR3105804 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR8975688 | XDR-TB | lineage4.4.1.1 | None | DRR130170 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806874 | MDR-TB | lineage4.4.1.1 | None | SRR16156717 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4831539 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11050382 | MDR-TB | lineage3 | None | ERR4830076 | HR-TB | lineage4.1.2.1 | None | ERR4811832 | MDR-TB | lineage4.3.3 | None | SRR28498417 | HR-TB | lineage4.1 | None | ERR13276319 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13243566 | MDR-TB | lineage2.2.1 | None | DRR130058 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748132 | XDR-TB | lineage4.4.1.1 | None | ERR9992668 | XDR-TB | lineage4.4.1.1 | None | ERR13258515 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | DRR130166 | XDR-TB | lineage2.2.1 | None | SRR16156754 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR16058495 | HR-TB | lineage4.1.3 | None | SRR16156722 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29094032 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4813688 | MDR-TB | lineage4.3.3 | None | SRR14801355 | Sensitive | lineage4.8 | None | ERR4797165 | Sensitive | lineage3.1.2.1 | in | ERR13258519 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156749 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4829745 | Sensitive | lineage4.7 | None | SRR16156726 | MDR-TB | lineage4.4.1.1 | None | ERR13260228 | MDR-TB | lineage4.3.3 | None | SRR29440724 | HR-TB | lineage3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR23861916 | Sensitive | lineage4.8 | None | SRR21732444 | Sensitive | lineage1.1.2 | None | ERR9119845 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR16156709 | MDR-TB | lineage4.4.1.1 | None | ERR13292356 | MDR-TB | lineage2.2.1.1 | None | ERR1035002 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR10465934 | Sensitive | lineage4.6 | None | ERR9806974 | Pre-XDR-TB | lineage4.4.1.1 | None |
|---|
