Rv3919c - c.386delG
Drug resistance types
0 Sensitive
3 RR-TB
38 HR-TB
97 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
98 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 73 |
| lineage3.1.2 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 9 |
| lineage4.8 | 4 |
| lineage3.1.1 | 34 |
| lineage4.1.2.1 | 8 |
| lineage1.1.1.1 | 9 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.2 | 4 |
| lineage1.1.2 | 10 |
| lineage1.2.1.2.1 | 7 |
| lineage4.8.1 | 8 |
| lineage4.1.1.3 | 5 |
| lineage4.4.1.1 | 3 |
| lineage1.2.2.2 | 7 |
| lineage2.2.1 | 2 |
| lineage4.9 | 17 |
| lineage4.1 | 1 |
| lineage4.5 | 6 |
| lineage1.2.1.2 | 4 |
| lineage2.2.2 | 1 |
| lineage3.1 | 4 |
| lineage2.1 | 5 |
| lineage3.1.2.1 | 4 |
| lineage4.6.2.2 | 3 |
| lineage4.4.2 | 1 |
| lineage4.1.4 | 4 |
| lineage1.1.3.1 | 2 |
| lineage4.2.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage3.1.3 | 3 |
| 1 | |
| lineage5.1.3 | 4 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage1.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.7 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 258 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21709612 | Other | lineage3 | None | ERR161061 | Other | lineage3 | mw | ERR163961 | Other | lineage3 | mw | SRR15014609 | MDR-TB | lineage3.1.2 | None | ERR181751 | Other | lineage3 | mw | SRR7585422 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR9807017 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR11082922 | MDR-TB | lineage4.8 | None | SRR3082081 | MDR-TB | lineage3.1.1 | None | ERR736881 | Other | lineage3 | None | SRR7069455 | Pre-XDR-TB | lineage3 | None | ERR1034674 | MDR-TB | lineage4.1.2.1 | co | SRR29056249 | Other | lineage1.1.1.1 | None | ERR6358848 | MDR-TB | lineage4.6.1.1 | None | ERR3324348 | Other | lineage1.1.3.2 | None | ERR4800457 | Other | lineage1.1.2 | in | SRR16058013 | HR-TB | lineage1.2.1.2.1 | None | SRR28858380 | MDR-TB | lineage3.1.1 | None | ERR163945 | Other | lineage3 | mw | SRR29055924 | MDR-TB | lineage4.8.1 | None | SRR22249942 | Other | lineage3 | None | SRR3085335 | MDR-TB | lineage3.1.1 | None | SRR29055928 | MDR-TB | lineage4.8.1 | None | SRR28859789 | Other | lineage4.1.1.3 | None | ERR270701 | HR-TB | lineage4.4.1.1 | None | ERR13291896 | Other | lineage3 | None | SRR26112492 | Other | lineage1.1.1.1 | None | SRR29231063 | Other | lineage3 | None | SRR16370249 | Other | lineage1.1.1.1 | None | SRR28044895 | MDR-TB | lineage1.2.2.2 | None | ERR13193994 | Other | lineage2.2.1 | None | ERR4822289 | MDR-TB | lineage3.1.1 | None | SRR13180221 | HR-TB | lineage3 | None | SRR29231545 | MDR-TB | lineage4.9 | None | SRR9028489 | MDR-TB | lineage3 | None | ERR13276033 | HR-TB | lineage4.1 | None | SRR29017434 | MDR-TB | lineage4.5 | None | SRR29096220 | Other | lineage1.1.2 | None | SRR26399637 | Other | lineage1.2.1.2.1 | None | ERR7361935 | HR-TB | lineage1.2.1.2 | None | SRR29051368 | Other | lineage1.1.1.1 | None | ERR9662700 | HR-TB | lineage4.5 | None | SRR29055634 | MDR-TB | lineage4.8.1 | None | ERR3273136 | MDR-TB | lineage2.2.2 | None | SRR28868610 | Other | lineage1.2.1.2.1 | None | SRR29016848 | MDR-TB | lineage3.1 | None | ERR4816696 | Other | lineage3 | None | SRR25207095 | MDR-TB | lineage4.5 | None | SRR22249632 | Other | lineage2.1 | None | ERR9806871 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR19241807 | MDR-TB | lineage4.1.2.1 | None | ERR7902721 | Other | lineage1.1.1.1 | None | SRR29358145 | HR-TB | lineage4.9 | None | SRR29096590 | MDR-TB | lineage4.9 | None | ERR2707058 | MDR-TB | lineage4.9 | cd | SRR29231855 | MDR-TB | lineage4.9 | None | ERR2653225 | MDR-TB | lineage4.8 | None | SRR29289142 | MDR-TB | lineage1.2.2.2 | None | ERR2707150 | MDR-TB | lineage4.9 | cd | SRR29231797 | MDR-TB | lineage4.9 | None | SRR28044411 | HR-TB | lineage3.1.2.1 | None | SRR6152933 | HR-TB | lineage1.2.1.2.1 | ca | SRR8651652 | MDR-TB | lineage2.1 | cn | ERR4828880 | RR-TB | lineage4.1.2.1 | it | ERR2510817 | HR-TB | lineage3.1.1 | it | ERR4830819 | HR-TB | lineage3.1.1 | et | ERR4830832 | MDR-TB | lineage3.1.1 | et | ERR4829093 | MDR-TB | lineage3.1.1 | dj | ERR4829101 | MDR-TB | lineage3.1.1 | dj | ERR4829106 | MDR-TB | lineage3.1.1 | dj | ERR4828305 | Other | lineage1.1.1.1 | vn | ERR216939 | Other | lineage3 | mw | ERR040126 | MDR-TB | lineage3.1.1 | ug | ERR182032 | Other | lineage3 | mw | ERR181766 | Other | lineage3 | mw | SRR11443995 | Other | lineage4.6.2.2 | None | SRR21733285 | HR-TB | lineage3.1.1 | None | SRR26056413 | Other | lineage1.1.2 | None | ERR4810632 | Other | lineage4.4.2 | cn | SRR28409444 | HR-TB | lineage1.1.2 | None | ERR9806929 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR7131298 | HR-TB | lineage3.1.1 | None | SRR16100708 | HR-TB | lineage3.1.1 | None | ERR773790 | Other | lineage3 | None | ERR212024 | Other | lineage3 | mw | ERR11043677 | MDR-TB | lineage3 | None | SRR6797384 | Other | lineage1.2.2.2 | None | ERR9806963 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR4276852 | MDR-TB | lineage3.1.1 | None | ERR550764 | MDR-TB | lineage3.1.1 | None | ERR13266663 | Other | lineage4.1.2.1 | None | ERR7737646 | MDR-TB | lineage3.1.1 | None | ERR2245301 | MDR-TB | lineage3.1.1 | no | SRR30180252 | MDR-TB | lineage4.5 | None | ERR161053 | Other | lineage3 | mw | SRR22048370 | Other | lineage4.6.2.2 | None | ERR4797497 | HR-TB | lineage1.1.2 | in | ERR9119527 | MDR-TB | lineage4.1.4 | None | SRR29055696 | MDR-TB | lineage4.8.1 | None | ERR13291769 | Other | lineage4.1.1.3 | None | SRR29385304 | MDR-TB | lineage2.2.1 | None | SRR29126581 | Other | lineage3 | None | ERR8025617 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13264988 | Other | lineage3 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4872121 | MDR-TB | lineage4.1.4 | None | ERR9125730 | HR-TB | lineage1.2.1.2.1 | None | ERR13267479 | Pre-XDR-TB | lineage3.1.1 | None | SRR7069912 | HR-TB | lineage3.1.1 | None | SRR13180223 | HR-TB | lineage3 | None | ERR190391 | Other | lineage3 | mw | SRR23862009 | Other | lineage4.8 | None | SRR19221465 | Other | lineage1.1.1.1 | None | SRR3082093 | MDR-TB | lineage3.1.1 | None | ERR13276225 | MDR-TB | lineage3.1.1 | None | SRR12882264 | HR-TB | lineage3.1.1 | None | ERR3324343 | Other | lineage1.1.3.2 | None | ERR13285350 | Other | lineage1.2.1.2 | None | SRR6650414 | Other | lineage1.1.3.1 | None | SRR21887703 | MDR-TB | lineage4.2.2 | None | ERR3256259 | MDR-TB | lineage4.3.4.2 | ph | SRR29231846 | MDR-TB | lineage4.9 | None | ERR2707045 | MDR-TB | lineage4.9 | cd | ERR2707047 | MDR-TB | lineage4.9 | cd | ERR2510448 | MDR-TB | lineage1.2.2.2 | pk | ERR117717 | MDR-TB | lineage3.1.3 | None | SRR13180222 | HR-TB | lineage3 | None | SRR3085342 | MDR-TB | lineage3.1.1 | None | SRR28046117 | Other | lineage1.2.2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6397810 | MDR-TB | lineage3 | ca | SRR28045826 | MDR-TB | lineage3 | None | ERR4872092 | MDR-TB | lineage4.1.4 | None | ERR1367631 | HR-TB | lineage3.1.1 | None | SRR2100368 | MDR-TB | lineage3.1.3 | None | ERR2677422 | MDR-TB | lineage3 | de | ERR2517012 | MDR-TB | lineage3.1.2.1 | gb | ERR2516879 | MDR-TB | lineage3.1.2.1 | gb | ERR2516837 | MDR-TB | lineage3.1.2.1 | gb | ERR2516790 | MDR-TB | lineage3.1.3 | gb | ERR4818495 | Other | lineage3 | gb | ERR4821720 | Other | lineage3 | gb | SRR11828985 | Pre-XDR-TB | lineage2.1 | th | ERR4831427 | MDR-TB | lineage3 | None | ERR4553646 | MDR-TB | None | ERR161118 | Other | lineage3 | mw | ERR176523 | Other | lineage3 | mw | SRR27450159 | Other | lineage1.1.1.1 | None | ERR4821325 | Other | lineage3 | None | ERR176576 | Other | lineage3 | mw | SRR28409675 | Other | lineage4.1.1.3 | None | ERR176646 | Other | lineage3 | mw | ERR212139 | Other | lineage3 | mw | ERR1034696 | Other | lineage1.1.2 | in | ERR161072 | Other | lineage3 | mw | ERR323099 | MDR-TB | lineage3 | None | ERR4796754 | Other | lineage4.1.2.1 | in | SRR29055664 | MDR-TB | lineage4.8.1 | None | SRR20958115 | HR-TB | lineage4.1.2.1 | None | SRR5818617 | MDR-TB | lineage3.1.1 | dj | ERR126633 | Other | lineage3 | mw | SRR7131291 | HR-TB | lineage5.1.3 | None | ERR4810472 | MDR-TB | lineage4.5 | cn | SRR15014737 | Pre-XDR-TB | lineage1.1.2 | None | SRR786669 | Pre-XDR-TB | lineage3.1.2 | None | ERR9806989 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR10465910 | HR-TB | lineage3 | None | SRR7131211 | HR-TB | lineage5.1.3 | None | ERR4829215 | HR-TB | lineage5.1.3 | None | ERR4553611 | MDR-TB | lineage3.1 | None | ERR3256254 | MDR-TB | lineage4.3.4.2 | ph | SRR11715716 | Pre-XDR-TB | lineage2.1 | None | ERR13261286 | HR-TB | lineage3 | None | SRR21732920 | Other | lineage1.2.1.2.1 | None | SRR28860161 | Other | lineage4.1.1.3 | None | SRR29358136 | HR-TB | lineage4.1.1.3;lineage4.9 | None | SRR21710923 | Other | lineage1.2.1.2.1 | None | ERR9119498 | MDR-TB | lineage4.1.4 | None | ERR13194026 | Other | lineage4 | None | SRR29093609 | RR-TB | lineage3 | None | ERR4798763 | Other | lineage1.1.2 | in | ERR216906 | Other | lineage3 | None | SRR28858679 | MDR-TB | lineage1.2.1.2 | None | ERR5897072 | Pre-XDR-TB | lineage3 | None | SRR29017220 | MDR-TB | lineage3.1 | None | SRR26112575 | Other | lineage4.1.1.3 | None | ERR13290137 | HR-TB | lineage4.4.1.1 | None | ERR1034678 | Pre-XDR-TB | lineage4.1.2.1 | co | SRR21689818 | Other | lineage1.2.1.2 | None | SRR29055616 | MDR-TB | lineage4.8.1 | None | ERR3324350 | Other | lineage1.1.3.2 | None | SRR5818451 | Other | lineage4.9 | None | SRR13180301 | HR-TB | lineage3 | None | SRR9028488 | MDR-TB | lineage3 | None | ERR4799883 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR2515024 | HR-TB | lineage3.1.1 | gb | ERR4553626 | MDR-TB | lineage3.1 | None | SRR29055368 | MDR-TB | lineage4.8.1 | None | ERR13291882 | HR-TB | lineage3.1.1 | None | ERR11050793 | Other | lineage3.1.1 | None | SRR6797731 | Other | lineage1.1.3.1 | None | ERR13284987 | MDR-TB | lineage4.8 | None | ERR323074 | Other | lineage3 | None | ERR13267672 | MDR-TB | lineage3 | None | ERR163976 | Other | lineage3 | mw | ERR7361996 | Other | lineage1.1.2 | None | SRR3082092 | MDR-TB | lineage3.1.1 | None | SRR15014651 | MDR-TB | lineage1.1.2 | None | SRR10040265 | MDR-TB | lineage4.2.2 | None | SRR29231660 | MDR-TB | lineage4.9 | None | SRR29231675 | MDR-TB | lineage4.9 | None | ERR2707086 | MDR-TB | lineage4.9 | cd | ERR2706947 | MDR-TB | lineage4.9 | cd | SRR29230774 | MDR-TB | lineage4.9 | None | SRR29055689 | MDR-TB | lineage4.8.1 | None | SRR27450124 | HR-TB | lineage1.1.1.1 | None | SRR29441018 | Other | lineage3 | None | SRR29289288 | MDR-TB | lineage3 | None | ERR751639 | Other | lineage4.5 | th | ERR2706913 | MDR-TB | lineage4.9 | cd | ERR7911616 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR7911643 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR4818838 | Other | lineage3 | None | ERR751853 | HR-TB | lineage1.1.1 | th | ERR7911701 | Pre-XDR-TB | lineage4.1.1.1 | za | ERR4817870 | HR-TB | lineage3.1.2 | gb | ERR2514760 | Pre-XDR-TB | lineage3 | gb | ERR2514077 | Other | lineage4.6.2.2 | gb | ERR2514637 | Other | lineage1.2.1.1 | gb | SRR5709748 | Pre-XDR-TB | lineage2.1 | th | SRR6046373 | HR-TB | lineage4.4.1.1 | gb | ERR2041752 | MDR-TB | lineage4.7 | rs | ERR2041735 | MDR-TB | lineage4.7 | rs | ERR036209 | Other | lineage3 | mw | ERR245669 | Other | lineage3 | mw | ERR037488 | Other | lineage3 | mw | ERR037482 | Other | lineage3 | mw | ERR245849 | Other | lineage3 | mw | ERR245793 | Other | lineage3 | mw | ERR245830 | Other | lineage3 | mw | ERR245753 | Other | lineage3 | mw | ERR245678 | Other | lineage3 | mw | ERR036195 | Other | lineage3 | mw | ERR245722 | Other | lineage3 | mw | ERR245682 | Other | lineage3 | mw | ERR176716 | Other | lineage3 | mw | SRR20139561 | RR-TB | lineage4.1.2.1 | None | ERR181773 | Other | lineage3 | mw | ERR181797 | Other | lineage3 | mw | ERR4819903 | Other | lineage3 | None | SRR9028481 | MDR-TB | lineage3 | None | ERR11044215 | MDR-TB | lineage3.1.1 | None | ERR4829258 | HR-TB | lineage5.1.3 | None | SRR29017031 | MDR-TB | lineage3 | None | SRR16627755 | Other | lineage1.2.2.2 | None | SRR5818636 | MDR-TB | lineage3.1.1 | dj | SRR5818620 | MDR-TB | lineage3.1.1 | dj | ERR13284423 | MDR-TB | lineage3.1.1 | None |
|---|
