Rv3919c - c.351dupG
Drug resistance types
0 Sensitive
5 RR-TB
34 HR-TB
96 MDR-TB
45 Pre-XDR-TB
5 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 73 |
| lineage4.2.1 | 12 |
| lineage1.1.3.1 | 4 |
| lineage1.1.2 | 32 |
| lineage4.3.3 | 9 |
| lineage4.9.1 | 3 |
| lineage4 | 4 |
| lineage1.2.1.2 | 2 |
| lineage4.1.1 | 3 |
| lineage4.1.2.1 | 19 |
| lineage2.2.1 | 13 |
| lineage1.2.1.2.1 | 8 |
| lineage3.1.2 | 4 |
| lineage4.8 | 14 |
| lineage4.4.1.1 | 18 |
| lineage4.3.4.2 | 7 |
| lineage4.3.4.1 | 4 |
| lineage3.1.3 | 1 |
| lineage2.2.2 | 5 |
| lineage4.6.4 | 1 |
| 3 | |
| lineage2.1 | 2 |
| lineage4.1.1.3 | 8 |
| lineage4.3.4 | 2 |
| lineage1.1.1.1 | 6 |
| lineage1.2.2.2 | 3 |
| lineage4.3.1 | 1 |
| lineage4.7 | 7 |
| lineage1.2.2.2;lineage3 | 1 |
| lineage4.2.2.1 | 2 |
| lineage4.1.2 | 3 |
| lineage4.5 | 2 |
| lineage1.2.2.2;lineage4.1.2 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.1;lineage4.3.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 2 |
| La1.2.BCG | 1 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 286 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13289981 | Other | lineage3 | None | SRR11033609 | Other | lineage4.2.1 | None | SRR29126344 | Other | lineage1.1.3.1 | None | SAMN02598977 | Other | lineage1.1.2 | None | SRR1173801 | Other | lineage3 | None | ERR4798927 | MDR-TB | lineage4.3.3 | in | SRR6982415 | Other | lineage4.9.1 | None | SRR15014724 | HR-TB | lineage1.1.2 | None | ERR4813641 | HR-TB | lineage4 | None | ERR13261562 | Other | lineage3 | None | SRR30182371 | Other | lineage1.2.1.2 | None | ERR13260651 | Pre-XDR-TB | lineage4.1.1 | None | SRR13583408 | MDR-TB | lineage4.1.2.1 | None | SRR22250061 | Other | lineage3 | None | SRR18289188 | Other | lineage1.1.2 | None | DRR188670 | HR-TB | lineage2.2.1 | None | ERR11067405 | HR-TB | lineage1.2.1.2.1 | None | ERR4796289 | MDR-TB | lineage3.1.2 | None | SRR29273866 | Pre-XDR-TB | lineage4.8 | None | SRR16370405 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR30180413 | MDR-TB | lineage4.3.4.2 | None | SRR29052641 | MDR-TB | lineage4.3.4.1 | None | ERR13248738 | MDR-TB | lineage2.2.1 | None | ERR4798282 | MDR-TB | lineage3 | in | ERR2510533 | MDR-TB | lineage3 | pk | ERR2510620 | MDR-TB | lineage3.1.3 | pk | ERR13191075 | Pre-XDR-TB | lineage2.2.2 | None | ERR13191094 | MDR-TB | lineage2.2.2 | None | ERR1679639 | Other | lineage4.6.4 | None | SRR1173567 | Other | lineage3 | None | SRR24114352 | Pre-XDR-TB | lineage3 | None | SRR24114346 | Other | lineage3 | None | SRR29289387 | MDR-TB | lineage3 | None | ERR4553961 | HR-TB | None | SRR22249747 | MDR-TB | lineage2.1 | None | SRR6152653 | HR-TB | lineage1.2.1.2.1 | ca | SAMN02598991 | Other | lineage3 | in | ERR5897092 | Pre-XDR-TB | lineage3 | None | SRR29772511 | MDR-TB | lineage1.1.2 | None | ERR751466 | MDR-TB | lineage4.1.1.3 | pe | ERR4457898 | HR-TB | lineage4 | None | ERR386986 | Other | lineage3 | None | SRR13583428 | MDR-TB | lineage4.1.2.1 | None | SRR21576617 | MDR-TB | lineage2.2.1 | None | SRR3105796 | Pre-XDR-TB | lineage3 | None | ERR1193674 | MDR-TB | lineage4.3.4 | ao | ERR2516996 | MDR-TB | lineage3 | gb | ERR2517599 | Other | lineage3 | nl | ERR4829534 | Other | lineage1.1.3.1 | it | ERR2513751 | Other | lineage3 | gb | ERR4831470 | Pre-XDR-TB | lineage3 | None | SRR5341363 | Pre-XDR-TB | lineage3 | in | SRR5341419 | Other | lineage4.1.1.3 | in | ERR11068115 | Other | lineage4.8 | None | SRR27107261 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR2653065 | MDR-TB | lineage4.3.3 | None | SRR29051513 | MDR-TB | lineage4.1.2.1 | None | SRR21732401 | Other | lineage1.1.1.1 | None | SRR29772415 | MDR-TB | lineage1.1.2 | None | ERR2510258 | Other | lineage3 | None | ERR13285127 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR15014607 | MDR-TB | lineage3 | None | SRR22250112 | Other | lineage1.2.1.2 | None | ERR4798277 | HR-TB | lineage1.2.2.2 | in | ERR9119486 | MDR-TB | lineage4.8 | None | SRR5074133 | Other | lineage1.1.1.1 | vn | SRR21576540 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049297 | Other | lineage3 | None | ERR11082270 | MDR-TB | lineage3 | None | ERR270775 | HR-TB | lineage3 | None | SRR786670 | Pre-XDR-TB | lineage3 | None | SRR18213926 | Other | lineage3 | None | SRR21576574 | MDR-TB | lineage2.1 | None | ERR2446172 | Other | lineage3 | nl | SRR1172971 | Other | lineage1.1.2 | None | SRR3085307 | Other | lineage1.1.2 | None | SRR10147709 | MDR-TB | lineage4.2.1 | None | SRR16087926 | Other | lineage4.1.2.1 | None | ERR13290706 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016806 | XDR-TB | lineage3 | None | SRR15014657 | MDR-TB | lineage1.1.2 | None | ERR9125204 | Other | lineage1.2.1.2.1 | None | ERR11043443 | Pre-XDR-TB | lineage4.3.4.2 | None | DRR130210 | MDR-TB | lineage2.2.1 | None | SRR25515856 | MDR-TB | lineage2.2.2 | None | ERR13264802 | Other | lineage3 | None | SRR16370417 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1172862 | Other | lineage1.1.2 | None | ERR13265532 | Other | lineage3 | None | ERR13262169 | XDR-TB | lineage3 | None | ERR3132144 | Other | lineage4.1.1.3 | None | DRR130164 | Pre-XDR-TB | lineage2.2.1 | None | ERR13194035 | MDR-TB | lineage4 | None | ERR4798614 | Other | lineage1.1.2 | in | ERR13290229 | Other | lineage3 | None | SRR1173345 | Other | lineage1.1.2 | None | ERR4830744 | RR-TB | lineage4.3.1 | None | SRR18289191 | Other | lineage1.1.3.1 | None | SRR29231734 | RR-TB | lineage4.7 | None | ERR13266552 | HR-TB | lineage1.2.2.2;lineage3 | None | SRR1173874 | Other | lineage1.1.2 | None | ERR5897080 | Pre-XDR-TB | lineage3 | None | ERR4457851 | HR-TB | lineage4 | None | ERR4553899 | HR-TB | None | ERR13285128 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29230902 | Other | lineage3 | None | SRR11033597 | Other | lineage4.2.1 | None | SRR29052906 | Other | lineage1.1.2 | None | SRR6832832 | Other | lineage4.3.3 | None | ERR13260027 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29231727 | MDR-TB | lineage4.3.4.1 | None | ERR10680029 | MDR-TB | lineage4.1.2.1 | None | ERR4796571 | Pre-XDR-TB | lineage4.8 | in | ERR2515520 | MDR-TB | lineage4.9.1 | za | ERR3335754 | MDR-TB | lineage3 | pk | SRR3725689 | Other | lineage4.7 | None | SRR16370439 | HR-TB | lineage4.2.2.1 | None | ERR3335801 | Pre-XDR-TB | lineage3 | pk | ERR2510631 | Pre-XDR-TB | lineage3 | pk | ERR4819455 | Other | lineage1.1.2 | None | SRR27107255 | MDR-TB | lineage4.4.1.1 | None | SRR28044328 | Other | lineage1.1.2 | None | ERR11811379 | Other | lineage4.2.1 | None | ERR2707005 | MDR-TB | lineage4.7 | cd | SRR10147688 | MDR-TB | lineage4.2.1 | None | SRR6832173 | Other | lineage4.3.3 | None | SRR22251402 | Other | lineage1.2.2.2 | None | SRR26397811 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR552944 | HR-TB | lineage3 | de | SRR2100294 | MDR-TB | lineage3 | None | SRR2100875 | HR-TB | lineage3 | None | SRR3675238 | Other | lineage3 | gb | SRR7341672 | MDR-TB | lineage4.1.2.1 | ro | ERR2517067 | MDR-TB | lineage3 | gb | ERR2516764 | Pre-XDR-TB | lineage3 | gb | ERR2516735 | MDR-TB | lineage4.4.1.1 | nl | ERR2516604 | MDR-TB | lineage3 | nl | ERR3287637 | MDR-TB | lineage4.1.1.3 | pe | ERR3287641 | MDR-TB | lineage4.1.1.3 | pe | ERR4830756 | MDR-TB | lineage4.2.1 | ir | ERR4830775 | MDR-TB | lineage4.2.1 | ir | ERR2512821 | MDR-TB | lineage3 | gb | ERR2513329 | Other | lineage3 | gb | ERR2513358 | HR-TB | lineage1.1.2 | gb | ERR4830352 | HR-TB | lineage1.1.1.1 | vn | SRR6045211 | Other | lineage3 | gb | SRR21675451 | MDR-TB | lineage4.3.4.1 | None | ERR8773914 | RR-TB | lineage4.3.3 | None | SRR16057910 | Other | lineage1.2.1.2.1 | None | SRR24827304 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13265422 | Other | lineage3 | None | SRR29051005 | MDR-TB | lineage4.1.2.1 | None | ERR4797597 | MDR-TB | lineage3.1.2 | in | ERR1213899 | Other | lineage4.1.1.3 | pe | SRR5073955 | Other | lineage1.1.1.1 | vn | SRR23861772 | Other | lineage4.2.1 | None | SRR10808654 | Other | lineage4.1.2 | None | ERR3275276 | Other | lineage3 | nl | ERR13266804 | MDR-TB | lineage1.2.2.2 | None | SRR16370615 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR114445 | MDR-TB | lineage3 | None | SAMN02599182 | Other | lineage1.1.2 | in | SRR20969988 | MDR-TB | lineage4.5 | None | ERR4811863 | Other | lineage4.1.2.1 | pe | SRR6832823 | Other | lineage4.3.3 | None | SRR9217356 | Other | lineage1.1.2 | None | ERR11068597 | Other | lineage4.8 | None | SRR23861788 | Other | lineage4.1.2.1 | None | ERR11082183 | Other | lineage3 | None | ERR11081307 | MDR-TB | lineage4.1.2.1 | None | SRR3105752 | MDR-TB | lineage1.2.2.2;lineage4.1.2 | None | SRR24083683 | Other | lineage1.1.1.1 | None | ERR4799423 | MDR-TB | lineage4.8 | in | SRR29056198 | Pre-XDR-TB | lineage4.4.1.1 | None | DRR261082 | HR-TB | lineage1.1.1.1 | None | SRR29772518 | MDR-TB | lineage1.1.2 | None | SRR27107252 | MDR-TB | lineage4.4.1.1 | None | SRR29053188 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29017089 | XDR-TB | lineage3 | None | ERR13289416 | HR-TB | lineage2.2.1 | None | SRR29273924 | Pre-XDR-TB | lineage4.8 | None | SRR28170846 | Other | lineage1.1.2 | None | SRR30180274 | MDR-TB | lineage2.2.1 | None | SRR30182712 | HR-TB | lineage1.2.1.2.1 | None | ERR13261301 | Pre-XDR-TB | lineage3 | None | SRR21746994 | MDR-TB | lineage2.2.1 | None | ERR13285129 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR13284650 | MDR-TB | lineage4.1.2.1 | None | SRR26399631 | Other | lineage4.2.2 | None | SRR29017098 | XDR-TB | lineage3 | None | SRR29231325 | MDR-TB | lineage4.7 | None | ERR8773912 | RR-TB | lineage4.3.3 | None | SRR21576690 | MDR-TB | lineage2.2.1 | None | SRR3086377 | Other | lineage1.1.2 | None | ERR13260199 | MDR-TB | lineage4.1.1 | None | SRR23862035 | Other | lineage4.8 | None | SRR29273883 | Pre-XDR-TB | lineage4.8 | None | ERR4799936 | MDR-TB | lineage4.3.3 | in | ERR4811809 | Other | lineage4.1.2.1 | None | ERR11811360 | Other | lineage4.2.1 | None | ERR13260487 | Other | lineage4.3.3 | None | SRR10808486 | Other | lineage4.1.2.1 | None | SRR21710932 | Other | lineage4.1.2.1 | None | ERR11043442 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR24710230 | Other | lineage4.1.2.1 | None | SRR16088533 | Other | lineage4.2.1 | None | ERR4553935 | HR-TB | None | ERR4799666 | MDR-TB | lineage3.1.2 | in | SRR10809123 | MDR-TB | lineage4.1.2.1 | None | SRR27107259 | MDR-TB | lineage4.4.1.1 | None | ERR10680007 | MDR-TB | lineage4.1.2.1 | None | SRR29017184 | XDR-TB | lineage3 | None | SRR28351261 | MDR-TB | lineage1.1.2 | None | ERR11591435 | MDR-TB | lineage4.3.4 | None | ERR2510629 | MDR-TB | lineage3 | pk | SRR29289362 | Pre-XDR-TB | lineage3 | None | SRR29772368 | MDR-TB | lineage3.1.2 | None | ERR5897087 | Pre-XDR-TB | lineage3 | None | ERR5897091 | Pre-XDR-TB | lineage3 | None | ERR4796578 | Other | lineage1.1.2 | in | SRR15368707 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR29289281 | Pre-XDR-TB | lineage3 | None | SRR29289286 | MDR-TB | lineage3 | None | ERR11068116 | Other | lineage4.8 | None | ERR11068162 | Other | lineage4.8 | None | SRR16058663 | HR-TB | lineage1.1.2 | None | SRR16089401 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR21732254 | HR-TB | lineage1.2.1.2.1 | None | ERR2706929 | MDR-TB | lineage4.3.4.1 | cd | ERR2707211 | RR-TB | lineage4.7 | cd | ERR751405 | MDR-TB | lineage4.1.1.3 | pe | SRR6982555 | Other | lineage4.7 | None | SRR7069250 | MDR-TB | lineage3 | None | SRR21733116 | Other | lineage1.2.1.2.1 | None | SRR2099960 | HR-TB | lineage1.1.2 | None | SRR2099967 | HR-TB | lineage1.1.2 | None | SRR2100628 | Other | lineage3 | None | SRR2101287 | Other | lineage3 | None | ERR4813384 | MDR-TB | lineage4.1.1;lineage4.3.3 | pe | ERR4813381 | MDR-TB | lineage4.1.1.3 | pe | ERR2184519 | Other | lineage4.1.2.1 | pe | ERR4828886 | HR-TB | lineage4.1.2 | None | ERR4829022 | Other | lineage1.1.2 | None | SRR6824616 | MDR-TB | lineage2.2.2 | cn | SRR8380875 | MDR-TB | lineage3 | in | ERR11080869 | Other | lineage4.6.2.2 | None | ERR4830886 | MDR-TB | lineage3 | None | SRR29053234 | HR-TB | lineage4.2.2.1 | None | ERR13290717 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125485 | HR-TB | lineage1.1.2 | None | SRR16088269 | Other | lineage4.2.1 | None | SRR6040103 | Other | lineage2.2.1.1 | au | ERR4816576 | HR-TB | lineage1.1.2 | None | SRR16088449 | Other | lineage4.2.1 | None | SRR29055460 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR8380945 | MDR-TB | lineage3 | in | SRR5067377 | Other | lineage4.4.2 | vn | SRR2101781 | Other | lineage4.7 | None | SRR21728165 | Other | lineage1.1.3.1 | None | SRR12882284 | Other | lineage1.1.2 | None | ERR12328183 | HR-TB | lineage1.2.1.2.1 | None | SRR12882727 | Other | lineage3 | None | ERR4872080 | MDR-TB | lineage4.8 | None | SRR26630744 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR8380890 | Pre-XDR-TB | lineage3 | in | SRR1723434 | MDR-TB | lineage2.2.2 | cn | SRR27107248 | MDR-TB | lineage4.4.1.1 | None | ERR4798224 | MDR-TB | lineage3 | in | SRR27107293 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10305760 | MDR-TB | lineage4.5 | None | ERR766225 | Other | La1.2.BCG | None | ERR270667 | HR-TB | lineage1.1.2 | None | ERR4872151 | MDR-TB | lineage4.8 | None | ERR11489021 | MDR-TB | lineage1.1.3.2 | None | ERR13260116 | MDR-TB | lineage4.1.1 | None | SRR6485039 | MDR-TB | lineage4.1.2.1 | None | SRR29055943 | MDR-TB | lineage4.9.1 | None | SRR20969380 | HR-TB | lineage4.4.2 | None | DRR188743 | MDR-TB | lineage2.2.1 | None | ERR2184368 | Other | lineage4.1.2 | None | ERR228274 | Other | lineage3 | None | ERR270677 | HR-TB | lineage1.1.2 | None | ERR13273046 | MDR-TB | lineage3 | None | ERR13265357 | Other | lineage3 | None | ERR11043440 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR9119553 | MDR-TB | lineage4.8 | None |
|---|
