Rv3862c - c.-217_92del
Drug resistance types
126 Sensitive
1 RR-TB
16 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 169 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2100242 | Sensitive | lineage1.1.3.1 | None | SRR2100399 | HR-TB | lineage1.1.3.1 | None | SRR2100919 | HR-TB | lineage1.1.3.1 | None | SRR2100982 | Sensitive | lineage1.1.3.1 | None | SRR2101002 | Sensitive | lineage1.1.3.1 | None | SRR2101094 | Sensitive | lineage1.1.3.1 | None | SRR2101104 | Sensitive | lineage1.1.3.1 | None | SRR2101821 | Sensitive | lineage1.1.3.1 | None | ERR551865 | Sensitive | lineage1.1.3.1 | cg | ERR551866 | Sensitive | lineage1.1.3.1 | None | ERR4814294 | Sensitive | lineage1.1.3.1 | gb | ERR4814533 | Sensitive | lineage1.1.3.1 | gb | ERR4814558 | Sensitive | lineage1.1.3.1 | gb | ERR4815834 | Sensitive | lineage1.1.3.1 | gb | ERR4817689 | Sensitive | lineage1.1.3.1 | gb | ERR4817777 | Sensitive | lineage1.1.3.1 | gb | ERR4818909 | HR-TB | lineage1.1.3.1 | gb | ERR4818927 | Sensitive | lineage1.1.3.1 | gb | ERR4821713 | Sensitive | lineage1.1.3.1 | gb | ERR4822190 | Sensitive | lineage1.1.3.1 | gb | ERR2513284 | Sensitive | lineage1.1.3.1 | gb | ERR2513304 | Sensitive | lineage1.1.3.1 | gb | ERR2513339 | Sensitive | lineage1.1.3.1 | gb | ERR2514993 | Sensitive | lineage1.1.3.1 | gb | ERR4828876 | Sensitive | lineage1.1.3.1 | None | ERR8975382 | Sensitive | lineage1.1.3.1 | None | ERR190377 | Sensitive | lineage1.1.3.1 | mw | SRR5818582 | Sensitive | lineage1.1.3.1 | dj | ERR2517128 | Sensitive | lineage1.1.3.1 | nl | ERR3275166 | Sensitive | lineage1.1.3.1 | nl | ERR2446323 | Sensitive | lineage1.1.3.1 | nl | SRR30182668 | Sensitive | lineage1.1.3.1 | None | SRR29772821 | MDR-TB | lineage1.1.3.1 | None | SRR29440890 | Other | lineage1.1.3.1 | None | SRR29126260 | Sensitive | lineage1.1.3.1 | None | SRR29126884 | Sensitive | lineage1.1.3.1 | None | SRR29441106 | Sensitive | lineage1.1.3.1 | None | SRR30182533 | Sensitive | lineage1.1.3.1 | None | ERR13291601 | Sensitive | lineage1.1.3.1 | None | SRR29440828 | Sensitive | lineage1.1.3.1 | None | SRR30182687 | Sensitive | lineage1.1.3.1 | None | SRR29126356 | Sensitive | lineage1.1.3.1 | None | SRR29440934 | Sensitive | lineage1.1.3.1 | None | SRR30182374 | Sensitive | lineage1.1.3.1 | None | ERR752237 | Other | lineage1.1.3.1 | th | ERR718527 | Other | lineage1.1.3.1 | th | ERR718388 | Sensitive | lineage1.1.3.1 | th | ERR767968 | HR-TB | lineage1.1.3.1 | th | ERR718329 | Other | lineage1.1.3.1 | th | SRR6152941 | Sensitive | lineage1.1.3.1 | ca | SRR2100038 | Other | lineage1.1.3.1 | None | SRR2100134 | Sensitive | lineage1.1.3.1 | None | SRR2100170 | HR-TB | lineage1.1.3.1 | None | SRR2100177 | HR-TB | lineage1.1.3.1 | None | SRR2100189 | HR-TB | lineage1.1.3.1 | None | SRR2100209 | HR-TB | lineage1.1.3.1 | None | SRR2100479 | Sensitive | lineage1.1.3.1 | None | SRR2100582 | Sensitive | lineage1.1.3.1 | None | SRR2100648 | Sensitive | lineage1.1.3.1 | None | SRR2100669 | Other | lineage1.1.3.1 | None | SRR2101221 | Sensitive | lineage1.1.3.1 | None | SRR2101252 | Sensitive | lineage1.1.3.1 | None | SRR1735632 | Sensitive | lineage1.1.3.1 | gb | ERR4829534 | Other | lineage1.1.3.1 | it | ERR4815173 | Other | lineage1.1.3.1 | gb | ERR4815371 | Sensitive | lineage1.1.3.1 | gb | ERR4815505 | Sensitive | lineage1.1.3.1 | gb | ERR4815728 | Sensitive | lineage1.1.3.1 | gb | ERR4817100 | Sensitive | lineage1.1.3.1 | gb | ERR4817210 | Sensitive | lineage1.1.3.1 | gb | ERR4817250 | Sensitive | lineage1.1.3.1 | gb | ERR4818552 | Sensitive | lineage1.1.3.1 | gb | ERR4818558 | Sensitive | lineage1.1.3.1 | gb | ERR4818826 | Sensitive | lineage1.1.3.1 | gb | ERR4820356 | Sensitive | lineage1.1.3.1 | gb | ERR2512806 | Sensitive | lineage1.1.3.1 | gb | ERR2512847 | Sensitive | lineage1.1.3.1 | gb | ERR2513061 | Sensitive | lineage1.1.3.1 | gb | ERR2512959 | Other | lineage1.1.3.1 | gb | ERR2513444 | Other | lineage1.1.3.1 | gb | ERR2513669 | Sensitive | lineage1.1.3.1 | gb | ERR2514192 | Sensitive | lineage1.1.3.1 | gb | ERR2514405 | Sensitive | lineage1.1.3.1 | gb | ERR2512631 | Sensitive | lineage1.1.3.1 | gb | ERR2512692 | Sensitive | lineage1.1.3.1 | gb | ERR2512698 | Sensitive | lineage1.1.3.1 | gb | ERR2512731 | Sensitive | lineage1.1.3.1 | gb | SRR6045338 | Other | lineage1.1.3.1 | gb | SRR6044977 | HR-TB | lineage1.1.3.1 | gb | SRR6046320 | Sensitive | lineage1.1.3.1 | gb | SRR29772718 | MDR-TB | lineage1.1.3.1 | None | ERR234197 | Sensitive | lineage1.1.3.1 | None | ERR126621 | Sensitive | lineage1.1.3.1 | mw | ERR2517287 | Sensitive | lineage1.1.3.1 | nl | ERR4831043 | Sensitive | lineage1.1.3.1 | np | ERR2446523 | RR-TB | lineage1.1.3.1 | nl | ERR2446216 | Sensitive | lineage1.1.3.1 | nl | SRR29126734 | Sensitive | lineage1.1.3.1 | None | SRR29440952 | Sensitive | lineage1.1.3.1 | None | SRR29126218 | Sensitive | lineage1.1.3.1 | None | SRR30182443 | Sensitive | lineage1.1.3.1 | None | ERR13291338 | Sensitive | lineage1.1.3.1 | None | ERR13290858 | Sensitive | lineage1.1.3.1 | None | SRR30182892 | Sensitive | lineage1.1.3.1 | None | ERR13289940 | Sensitive | lineage1.1.3.1 | None | ERR13291234 | HR-TB | lineage1.1.3.1 | None | SRR29126308 | Sensitive | lineage1.1.3.1 | None | SRR30182626 | Sensitive | lineage1.1.3.1 | None | ERR751757 | Sensitive | lineage1.1.3.1 | th | ERR718270 | Sensitive | lineage1.1.3.1 | th | ERR752166 | Sensitive | lineage1.1.3.1 | th | ERR751842 | Sensitive | lineage1.1.3.1 | th | ERR751991 | Sensitive | lineage1.1.3.1 | th | SRR6397656 | Sensitive | lineage1.1.3.1 | ca | SRR2099957 | HR-TB | lineage1.1.3.1 | None | SRR2100691 | Sensitive | lineage1.1.3.1 | None | SRR2100690 | Sensitive | lineage1.1.3.1 | None | SRR2100847 | Sensitive | lineage1.1.3.1 | None | ERR718544 | Other | lineage1.1.3.1 | th | ERR2516763 | MDR-TB | lineage1.1.3.1 | gb | ERR2516881 | MDR-TB | lineage1.1.3.1 | gb | ERR2516833 | MDR-TB | lineage1.1.3.1 | gb | ERR2517508 | Sensitive | lineage1.1.3.1 | nl | ERR4829026 | Sensitive | lineage1.1.3.1 | it | ERR4829793 | Sensitive | lineage1.1.3.1 | it | ERR4814800 | Sensitive | lineage1.1.3.1 | gb | ERR4814819 | HR-TB | lineage1.1.3.1 | gb | ERR4816436 | Sensitive | lineage1.1.3.1 | gb | ERR4816514 | HR-TB | lineage1.1.3.1 | gb | ERR4817824 | Other | lineage1.1.3.1 | gb | ERR4818025 | Sensitive | lineage1.1.3.1 | gb | ERR4818189 | Sensitive | lineage1.1.3.1 | gb | ERR4818207 | Sensitive | lineage1.1.3.1 | gb | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR4819502 | Sensitive | lineage1.1.3.1 | gb | ERR4819543 | Sensitive | lineage1.1.3.1 | gb | ERR4821381 | Sensitive | lineage1.1.3.1 | gb | ERR4821533 | Sensitive | lineage1.1.3.1 | gb | ERR2513124 | Sensitive | lineage1.1.3.1 | gb | ERR2513176 | Sensitive | lineage1.1.3.1 | gb | ERR2513736 | Sensitive | lineage1.1.3.1 | gb | ERR2513776 | Sensitive | lineage1.1.3.1 | gb | ERR2513796 | Sensitive | lineage1.1.3.1 | gb | ERR2514688 | Sensitive | lineage1.1.3.1 | gb | ERR2515035 | Sensitive | lineage1.1.3.1 | gb | SRR6045857 | Sensitive | lineage1.1.3.1 | gb | SRR5818649 | Sensitive | lineage1.1.3.1 | dj | ERR3275623 | Sensitive | lineage1.1.3.1 | nl | SRR29440937 | Sensitive | lineage1.1.3.1 | None | SRR30182885 | Sensitive | lineage1.1.3.1 | None | SRR29126344 | Other | lineage1.1.3.1 | None | SRR29126518 | Other | lineage1.1.3.1 | None | SRR29126868 | Sensitive | lineage1.1.3.1 | None | SRR29772490 | MDR-TB | lineage1.1.3.1 | None | SRR29772664 | MDR-TB | lineage1.1.3.1 | None | SRR29126648 | Sensitive | lineage1.1.3.1 | None | SRR29440739 | Sensitive | lineage1.1.3.1 | None | SRR29772507 | MDR-TB | lineage1.1.3.1 | None | ERR752083 | Other | lineage1.1.3.1 | th | ERR751703 | Sensitive | lineage1.1.3.1 | th | ERR752005 | Sensitive | lineage1.1.3.1 | th | ERR751667 | HR-TB | lineage1.1.3.1 | th | ERR718327 | HR-TB | lineage1.1.3.1 | th | ERR718289 | Other | lineage1.1.3.1 | th | ERR718382 | Sensitive | lineage1.1.3.1 | th | ERR752092 | HR-TB | lineage1.1.3.1 | th | ERR752072 | Other | lineage1.1.3.1 | th | SRR6397451 | Sensitive | lineage1.1.3.1 | ca | SRR6397543 | Sensitive | lineage1.1.3.1 | ca |
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