Rv3854c - c.1391dupA
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
114 MDR-TB
53 Pre-XDR-TB
8 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 165 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 3 |
| lineage4.1.2.1;lineage4.8 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4829621 | XDR-TB | lineage4.8 | None | SRR29274173 | MDR-TB | lineage4.8 | None | SRR7592369 | MDR-TB | lineage4.8 | None | SRR7781495 | Pre-XDR-TB | lineage4.8 | None | SRR9738482 | MDR-TB | lineage4.8 | None | SRR29274034 | MDR-TB | lineage4.8 | None | SRR29273749 | MDR-TB | lineage4.8 | None | SRR29273704 | MDR-TB | lineage4.8 | None | SRR29273606 | MDR-TB | lineage4.8 | None | SRR29273932 | Pre-XDR-TB | lineage4.8 | None | SRR29273676 | MDR-TB | lineage4.8 | None | ERR4276875 | MDR-TB | lineage4.8 | None | SRR29273615 | Pre-XDR-TB | lineage4.8 | None | SRR23086709 | Pre-XDR-TB | lineage4.8 | None | SRR1166094 | Pre-XDR-TB | lineage4.8 | ro | ERR1163058 | MDR-TB | lineage4.8 | None | SRR29273717 | MDR-TB | lineage4.8 | None | ERR4276876 | MDR-TB | lineage4.8 | None | SRR29126177 | Pre-XDR-TB | lineage4.8 | None | SRR29273928 | Pre-XDR-TB | lineage4.8 | None | SRR29273631 | MDR-TB | lineage4.8 | None | SRR23086729 | Pre-XDR-TB | lineage4.8 | None | SRR29341460 | XDR-TB | lineage4.8 | None | SRR23086707 | Pre-XDR-TB | lineage4.8 | None | SRR29273729 | MDR-TB | lineage4.8 | None | SRR29273891 | MDR-TB | lineage4.8 | None | SRR28646110 | MDR-TB | lineage4.8 | None | ERR9896094 | MDR-TB | lineage4.8 | None | ERR4829396 | Pre-XDR-TB | lineage4.8 | None | ERR4828864 | MDR-TB | lineage4.8 | None | ERR4828870 | Pre-XDR-TB | lineage4.8 | None | ERR4828910 | MDR-TB | lineage4.8 | None | SRR24466763 | MDR-TB | lineage4.8 | None | ERR4829648 | Pre-XDR-TB | lineage4.8 | None | SRR29273907 | MDR-TB | lineage4.8 | None | SRR3082124 | MDR-TB | lineage4.8 | None | SRR10305990 | MDR-TB | lineage2.2.1 | None | ERR4829880 | Pre-XDR-TB | lineage4.8 | it | ERR1163057 | MDR-TB | lineage4.8 | None | SRR7592322 | MDR-TB | lineage4.8 | None | ERR13264915 | Pre-XDR-TB | lineage4.8 | None | SRR5486892 | Pre-XDR-TB | lineage4.8 | None | SRR7592380 | Pre-XDR-TB | lineage4.8 | None | SRR29274123 | MDR-TB | lineage4.8 | None | SRR1166130 | MDR-TB | lineage4.8 | ro | SRR29273654 | MDR-TB | lineage4.8 | None | SRR9738507 | MDR-TB | lineage4.8 | None | SRR29124293 | Pre-XDR-TB | lineage4.8 | None | SRR29274154 | MDR-TB | lineage4.8 | None | ERR13264917 | MDR-TB | lineage4.8 | None | SRR29274028 | MDR-TB | lineage4.8 | None | SRR1166121 | MDR-TB | lineage4.8 | ro | SRR29273730 | MDR-TB | lineage4.8 | None | SRR29126320 | Pre-XDR-TB | lineage4.8 | None | SRR29274065 | MDR-TB | lineage4.8 | None | SRR29273825 | MDR-TB | lineage4.8 | None | SRR29127138 | Pre-XDR-TB | lineage4.8 | None | ERR4829795 | MDR-TB | lineage4.8 | None | SRR9738544 | Pre-XDR-TB | lineage4.8 | None | SRR9738521 | MDR-TB | lineage4.8 | None | SRR29274011 | MDR-TB | lineage4.8 | None | ERR4195569 | Pre-XDR-TB | lineage4.8 | None | SRR24466748 | MDR-TB | lineage4.8 | None | SRR7341662 | MDR-TB | lineage4.8 | ro | SRR7341688 | MDR-TB | lineage4.8 | ro | SRR7341656 | MDR-TB | lineage4.8 | ro | SRR7341679 | MDR-TB | lineage4.8 | ro | SRR7341677 | MDR-TB | lineage4.8 | ro | SRR7341697 | MDR-TB | lineage4.8 | ro | SRR7341645 | MDR-TB | lineage4.8 | ro | SRR7341665 | MDR-TB | lineage4.8 | ro | SRR7341696 | MDR-TB | lineage4.8 | ro | SRR7341687 | Pre-XDR-TB | lineage4.8 | ro | SRR7341666 | MDR-TB | lineage4.8 | ro | SRR7341670 | MDR-TB | lineage4.8 | ro | SRR7341642 | MDR-TB | lineage4.8 | ro | ERR2516597 | XDR-TB | lineage4.1.2.1 | pe | ERR2510706 | MDR-TB | lineage4.8 | it | ERR2510832 | MDR-TB | lineage4.8 | it | ERR4829002 | MDR-TB | lineage4.8 | it | ERR4829926 | Pre-XDR-TB | lineage4.8 | it | ERR4829109 | MDR-TB | lineage4.8 | it | ERR4829602 | Pre-XDR-TB | lineage4.8 | it | ERR4829789 | Pre-XDR-TB | lineage4.8 | it | SRR8649108 | Pre-XDR-TB | lineage4.8 | None | SRR28646082 | MDR-TB | lineage4.1.2.1;lineage4.8 | None | ERR1163053 | MDR-TB | lineage4.8 | None | SRR29273896 | MDR-TB | lineage4.8 | None | SRR10525348 | MDR-TB | lineage4.8 | None | ERR4822340 | Pre-XDR-TB | lineage4.8 | de | SRR1723798 | MDR-TB | lineage2.2.1 | cn | SRR29273915 | MDR-TB | lineage4.8 | None | SRR1166190 | Pre-XDR-TB | lineage4.8 | ro | SRR29273964 | Pre-XDR-TB | lineage4.8 | None | SRR23086717 | XDR-TB | lineage4.8 | None | ERR11043439 | MDR-TB | lineage4.8 | None | SRR29273989 | MDR-TB | lineage4.8 | None | SRR29273892 | MDR-TB | lineage4.8 | None | SRR29274020 | MDR-TB | lineage4.8 | None | SRR29273849 | MDR-TB | lineage4.8 | None | SRR29274110 | MDR-TB | lineage4.8 | None | SRR29341534 | MDR-TB | lineage4.8 | None | SRR29274217 | Pre-XDR-TB | lineage4.8 | None | SRR29273958 | MDR-TB | lineage4.8 | None | SRR29274184 | MDR-TB | lineage4.1.2.1;lineage4.8 | None | SRR29273623 | MDR-TB | lineage4.8 | None | SRR29273644 | Pre-XDR-TB | lineage4.8 | None | SRR29273903 | MDR-TB | lineage4.8 | None | ERR4829834 | MDR-TB | lineage4.8 | None | SRR29274060 | MDR-TB | lineage4.8 | None | SRR29273632 | MDR-TB | lineage4.8 | None | SRR29341591 | XDR-TB | lineage4.8 | None | SRR29341607 | Pre-XDR-TB | lineage4.8 | None | SRR29273940 | MDR-TB | lineage4.8 | None | SRR29274204 | MDR-TB | lineage4.8 | None | SRR29273942 | MDR-TB | lineage4.8 | None | SRR29274132 | MDR-TB | lineage4.8 | None | ERR1163052 | MDR-TB | lineage4.8 | None | SRR29274180 | MDR-TB | lineage4.1.2.1;lineage4.8 | None | SRR29341610 | Pre-XDR-TB | lineage4.8 | None | SRR29273983 | MDR-TB | lineage4.8 | None | SRR29273611 | MDR-TB | lineage4.8 | None | SRR5486868 | MDR-TB | lineage4.8 | None | SRR29274100 | MDR-TB | lineage4.8 | None | SRR23086726 | Pre-XDR-TB | lineage4.8 | None | ERR4829107 | Pre-XDR-TB | lineage4.8 | None | ERR9121627 | Pre-XDR-TB | lineage4.8 | None | SRR23086728 | Pre-XDR-TB | lineage4.8 | None | ERR4829791 | XDR-TB | lineage4.8 | None | SRR9738517 | Pre-XDR-TB | lineage4.8 | None | ERR2516136 | Pre-XDR-TB | lineage4.8 | es | ERR2516405 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516698 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2510657 | MDR-TB | lineage4.8 | it | ERR2510685 | MDR-TB | lineage4.8 | it | ERR2510689 | MDR-TB | lineage4.8 | it | ERR4829371 | Pre-XDR-TB | lineage4.8 | it | ERR4829412 | Pre-XDR-TB | lineage4.8 | it | ERR4829568 | Pre-XDR-TB | lineage4.8 | it | ERR4817721 | MDR-TB | lineage4.8 | gb | ERR4819070 | MDR-TB | lineage4.8 | gb | SRR6824454 | MDR-TB | lineage2.2.1 | cn | SRR7592334 | MDR-TB | lineage4.8 | None | SRR29126492 | Pre-XDR-TB | lineage4.8 | None | SRR22048307 | MDR-TB | lineage4.8 | None | SRR29273971 | MDR-TB | lineage4.8 | None | SRR29273953 | Pre-XDR-TB | lineage4.8 | None | SRR29274045 | MDR-TB | lineage4.8 | None | SRR9738528 | Pre-XDR-TB | lineage4.8 | None | SRR28646081 | MDR-TB | lineage4.8 | None | ERR4831271 | MDR-TB | lineage4.8 | de | SRR9738555 | Pre-XDR-TB | lineage4.8 | None | SRR19115697 | MDR-TB | lineage4.8 | None | SRR23086708 | Pre-XDR-TB | lineage4.8 | None | SRR29273875 | MDR-TB | lineage4.8 | None | SRR29274005 | MDR-TB | lineage4.8 | None | SRR29274128 | MDR-TB | lineage4.8 | None | SRR29273970 | MDR-TB | lineage4.8 | None | SRR29126313 | Pre-XDR-TB | lineage4.8 | None | SRR29274023 | MDR-TB | lineage4.8 | None | SRR29273857 | MDR-TB | lineage4.8 | None | SRR29273929 | MDR-TB | lineage4.8 | None | SRR23086710 | XDR-TB | lineage4.8 | None | SRR9738543 | MDR-TB | lineage4.8 | None | SRR23086704 | Pre-XDR-TB | lineage4.8 | None | SRR29274752 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273960 | MDR-TB | lineage4.8 | None | SRR29273784 | MDR-TB | lineage4.8 | None | SRR10525373 | MDR-TB | lineage4.8 | None | SRR29274099 | MDR-TB | lineage4.8 | None | SRR29273845 | MDR-TB | lineage4.8 | None | SRR29274148 | MDR-TB | lineage4.8 | None | SRR29273758 | MDR-TB | lineage4.8 | None | SRR29124291 | XDR-TB | lineage4.8 | None |
|---|
