Rv3854c - c.1034delA
Drug resistance types
0 Sensitive
1 RR-TB
8 HR-TB
15 MDR-TB
9 Pre-XDR-TB
2 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 50 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 13 |
| lineage1.1.2 | 5 |
| lineage1.1.1;lineage2.2.1.2 | 2 |
| lineage1.1.1.1;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.1 | 6 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26399596 | HR-TB | lineage1.1.1 | None | SRR25827747 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR19241768 | MDR-TB | lineage4.1.2.1 | None | SRR29051599 | HR-TB | lineage1.1.1 | None | SRR14802199 | Other | lineage2.2.1 | None | SRR29051405 | Other | lineage1.1.1 | None | ERR4820942 | RR-TB | lineage1.1.2 | None | SRR29051407 | Other | lineage1.1.1 | None | SRR26936941 | MDR-TB | lineage1.1.1 | None | SRR29050611 | Other | lineage1.1.1 | None | SRR21733184 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801561 | Other | lineage2.2.1 | None | SRR29051165 | Other | lineage1.1.1;lineage2.2.1.2 | None | ERR4830347 | HR-TB | lineage1.1.1.1;lineage2.2.1 | vn | SRR17729346 | Other | lineage1.1.1 | None | ERR9119423 | Other | lineage1.1.1 | None | SRR26400030 | Other | lineage1.1.1 | None | ERR4819512 | MDR-TB | lineage1.1.2 | gb | ERR5863749 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393545 | MDR-TB | lineage4.1.1.3 | None | ERR2517318 | HR-TB | lineage4.3.1 | nl | SRR26399956 | Other | lineage1.1.1 | None | SRR14801560 | Other | lineage2.2.1 | None | SRR1723807 | MDR-TB | lineage2.2.1 | cn | ERR2446114 | HR-TB | lineage4.3.1 | nl | SRR16370336 | MDR-TB | lineage1.1.1 | None | SRR26399351 | Other | lineage1.1.1 | None | SRR28868628 | Other | lineage1.1.1 | None | SRR14801493 | Other | lineage2.2.1 | None | SRR26399839 | Other | lineage1.1.1 | None | ERR4818203 | MDR-TB | lineage1.1.2 | None | SRR26399726 | Other | lineage1.1.1 | None | ERR5865677 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827790 | XDR-TB | lineage2.2.1;lineage3 | None | SRR17729418 | Other | lineage1.1.1 | None | SRR17729341 | Other | lineage1.1.1 | None | SRR11662211 | MDR-TB | lineage1.1.1 | None | ERR7737716 | MDR-TB | lineage1.1.1 | None | ERR9125894 | Other | lineage1.1.1 | None | SRR28394189 | MDR-TB | lineage4.1.2.1 | None | ERR3014602 | Pre-XDR-TB | lineage4.3.1 | None | ERR7911156 | MDR-TB | lineage1.1.1 | vn | ERR4815688 | MDR-TB | lineage1.1.2 | gb | ERR4830200 | Other | lineage1.1.1 | vn | ERR4828585 | Other | lineage1.1.1 | vn | SRR16058258 | Other | lineage1.1.1 | None | SRR8217889 | HR-TB | lineage1.1.1 | None | ERR4820283 | MDR-TB | lineage1.1.2 | None | ERR4828964 | MDR-TB | lineage4.3.1 | None | SRR8217936 | Other | lineage1.1.1 | None | SRR5073518 | Other | lineage1.1.1 | vn | SRR21733074 | Other | lineage1.1.1 | None | ERR3275674 | HR-TB | lineage4.3.1 | nl | ERR2843440 | Other | lineage1.1.1 | None | ERR5863750 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290889 | HR-TB | lineage1.1.1 | None | SRR30182624 | Other | lineage1.1.1 | None | ERR9119358 | Other | lineage1.1.1 | None | SRR29440973 | Other | lineage1.1.1 | None | ERR4828804 | MDR-TB | lineage4.3.1 | None | SRR17729358 | Other | lineage1.1.1 | None | SRR6785251 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044747 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399725 | Other | lineage1.1.1 | None | ERR718495 | Other | lineage1.1.1 | th | ERR4830402 | Other | lineage1.1.1 | vn | ERR4828390 | Other | lineage1.1.1 | vn | ERR4828389 | Other | lineage1.1.1;lineage2.2.1.2 | vn | ERR4828524 | Other | lineage1.1.1 | vn | SRR5709941 | Other | lineage1.1.1 | th | SRR5065386 | Other | lineage1.1.1 | vn | ERR5865678 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065322 | Other | lineage1.1.1 | vn | SRR5067517 | Other | lineage1.1.1 | vn | SRR5067357 | Other | lineage1.1.1 | vn | SRR5073705 | Other | lineage1.1.1 | vn | SRR5073987 | Other | lineage1.1.1 | vn | SRR5074079 | Other | lineage1.1.1 | vn | SRR7653608 | Pre-XDR-TB | lineage2.2.1 | None | SRR17729402 | Other | lineage1.1.1 | None | ERR2843438 | Other | lineage1.1.1 | None | ERR2843439 | Other | lineage1.1.1 | None |
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