Rv3795 - c.1648C>T
Drug resistance types
20 Sensitive
4 RR-TB
14 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.9 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage4.9 | 9 |
| lineage4.3.3 | 20 |
| lineage4.5 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| La3;lineage4.3.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.3.1;lineage4.7 | 2 |
| La1.7;lineage4.2 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | SRR21691065 | Sensitive | lineage4.3.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR28394010 | MDR-TB | lineage4.3.3 | None | ERR4810471 | Pre-XDR-TB | lineage4.5 | cn | ERR9787014 | Other | lineage6.1.1 | None | ERR11067237 | Sensitive | lineage4.1.2.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR29050859 | Other | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR25207096 | Pre-XDR-TB | lineage4.5 | None | ERR4024966 | Sensitive | lineage4.3.3 | None | ERR4812184 | Sensitive | lineage4.3.3 | pe | ERR6866128 | Sensitive | lineage4.3.3 | None | SRR29096150 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR6866843 | Sensitive | lineage4.3.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4813274 | MDR-TB | lineage4.3.3 | pe | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR16915726 | Sensitive | lineage4.3.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4813647 | Pre-XDR-TB | lineage4.3.3 | None | ERR4178152 | Sensitive | lineage4.3.3 | None | ERR6865363 | Sensitive | lineage4.3.3 | None | ERR6866148 | Sensitive | lineage4.3.3 | None | SRR21713566 | Sensitive | lineage4.3.3 | None | SRR21276958 | MDR-TB | lineage4.4.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4827636 | HR-TB | lineage4.2.1 | None | ERR212123 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR24827290 | Sensitive | lineage4.3.3 | None | ERR6865684 | Sensitive | lineage4.3.3 | None | SRR28860160 | Sensitive | lineage4.3.3 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4812230 | Sensitive | lineage4.3.3 | pe | SRR29126435 | Sensitive | lineage4.3.3 | None | SRR29231568 | RR-TB | lineage1.1.3.1;lineage4.7 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR16915755 | Sensitive | lineage4.3.3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR2706927 | RR-TB | lineage1.1.3.1;lineage4.7 | cd |
|---|
