Rv3596c - c.759A>C


Drug resistance types
40 Sensitive 20 RR-TB 49 HR-TB 44 MDR-TB 10 Pre-XDR-TB 2 XDR-TB 191 Other
lineage Counts
lineage Count
lineage4.8 10
lineage2.2.1 24
lineage4.9 99
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.1.2.1 13
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 3
lineage4.6.1.1 1
lineage2.2.2 3
lineage4.3.3;lineage4.8 3
La3;lineage4 1
lineage6.3.1 1
lineage2.1;lineage4.9 14
La3;M.canetti;lineage2.2.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1 5
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage2 1
La3;lineage2.1;lineage4.9 2
La1.7;lineage4.9;lineage7 3
lineage4.2.2.2 2
lineage4.1.1.1 5
lineage3 7
lineage4.3 1
La1.7;lineage4.9 3
lineage4.3.4.2.1 4
lineage4.9;lineage9 2
La3;lineage4.9 11
lineage4.4.1.1 2
25
lineage4.5 1
lineage3.1.2.2 1
lineage4.6.1.2 5
lineage3.1.1 1
lineage4.9;lineage6.3 9
lineage4 3
La2;lineage4.9;lineage9 1
La3 2
lineage4.3.4.1 1
lineage4.3.3 3
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.4.2 1
lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
lineage6.1.3 1
lineage1.1.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.2.1 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage1.1.2 1
lineage4.1.1.3 4
La3;lineage2.1;lineage4.9;lineage6.3 4
La2;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage2.2.1;lineage3 1
La1.7;M.canetti;lineage4.9 2
La2 1
La1.7.1 1
La3;lineage2.2.1 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1.3 1
lineage4.1.3 2
lineage2.1;lineage6.3 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage3.1 1
lineage4.6.2.2 1
lineage4.1.1.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 1
lineage1.1;lineage4 1
lineage2.2;lineage4 1
lineage4.4 1
lineage2.2.1;lineage6.3 1
lineage2.2.2;lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.2 1
lineage4.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7;lineage4.2 1
lineage4.6.3;lineage4.9 1
La1.8.1 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 356
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786569 Other lineage4.8 None
SRR7645906 Other lineage2.2.1 None
SRR3675275 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR6358755 Other lineage4.6.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR3283028 Other La3;lineage4 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR3275941 RR-TB lineage4.3 nl
ERR4816585 Other lineage2.2 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046521 Other lineage4.4.1.1 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR1196474 Other lineage3.1.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR3283044 Other lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323037 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR1172728 RR-TB La3 None
ERR971389 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675549 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR16156697 RR-TB lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR3675311 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
SRR29097037 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR28044634 Other lineage3 None
ERR2514692 Other None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR9971122 MDR-TB lineage4.8 None
SRR1173153 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3797079 Sensitive lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1184372 MDR-TB None
SRR1173633 Other lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR4819314 Other lineage1.1.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5341373 Other lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
ERR2514327 HR-TB lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR22424765 HR-TB lineage4.8 None
ERR4819932 Other lineage4.7 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR1169194 Other lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797048 Other La3;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341293 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6789626 Other None
SRR29051077 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR13888750 Other La2 None
ERR9786617 Other lineage4.1.1.1 None
SRR21469201 Other La1.7.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR3283021 HR-TB lineage4.9 None
SRR7535086 Other None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
SRR12416840 MDR-TB lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2229542 Other lineage4.8 None
ERR3797065 RR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR4815556 RR-TB lineage3 None
SRR7070157 Other lineage4.1.1.3.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
ERR4817069 RR-TB None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
ERR234659 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3797087 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR29096541 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
SRR1173788 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
SRR3675214 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR7496517 Other None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819322 Other lineage1.1;lineage4 None
ERR736848 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR11081257 Other lineage4.8 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR13423649 Sensitive lineage2.2.1 None
SRR26159043 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR28119753 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR16157123 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR29093909 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR29051093 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR1165699 Other lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR4800341 Other lineage3 None
SRR28119777 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4817554 Other lineage1.1.1 None
ERR3797086 Sensitive lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR28119752 Other lineage4.9 None
ERR2432997 Other lineage4.8 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR736831 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR18003024 RR-TB lineage2.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4817915 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6044855 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4816322 Other lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None