Rv3596c - c.414G>C


Drug resistance types
64 Sensitive 5 RR-TB 74 HR-TB 31 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 179 Other
lineage Counts
lineage Count
La1.2;La1.8.1 1
lineage4.9 126
La1.7;lineage3.1;lineage4 1
25
La3;lineage4.9 12
lineage4.1.1.1 3
lineage3.1.2.2 1
La3;lineage2.2.1 2
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
lineage3 5
La1;lineage2;lineage4.9 1
lineage4.9;lineage9 2
lineage2.2.2;lineage4 1
lineage2.1;lineage4.9 14
lineage2.2.1 21
lineage2.1;lineage4.9;lineage6.3 9
lineage4.1.3 2
lineage4.8 3
La1.8.1 1
lineage4.9;lineage6.3 8
La1;lineage4.1.2 1
lineage2.1 5
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 2
lineage2.2 5
lineage4.4.1.1 2
lineage2;lineage4 1
lineage5.1.4 1
lineage4.1.2.1 13
La1.7;lineage4.9 7
lineage4.3.3 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.2.2 3
La1.7;lineage4.9;lineage6 1
La3;lineage4 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
lineage2.2;lineage4.9 1
lineage4.3.4.2.1 3
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage1;lineage4.9 2
lineage4 1
La1;lineage4.9 2
La1.7.1;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.4.2 1
lineage2.2.1.1 1
lineage1.2.2.2 1
lineage5.2 2
lineage4.3.4.1 2
lineage1.1.2 2
lineage2.2.1.2 2
lineage4.3.4.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.1 2
lineage4.1.1.3 2
La1.7;lineage4.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
lineage4.7 2
lineage2.2.1;lineage4.9 1
lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
La3;lineage1.1.2 1
La1.7.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.2.2 1
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La3 2
lineage4.4.1.2 1
lineage3.1 1
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage4.1 1
La1.6;lineage4 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.5 1
lineage4.6.1.1 1
lineage4.2.1.1;lineage4.3.3 1
La3;lineage4.8 1
lineage4.3.4 1
La2;lineage4.9 2
spoligotype Counts
spoligotype Count
None 362
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4816999 Other None
ERR3797063 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4797588 MDR-TB lineage3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR161037 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR29096659 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR212138 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4800341 Other lineage3 None
ERR5311077 Other La1.8.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR6046594 Sensitive lineage4.9 None
ERR9117709 Other None
SRR29096150 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR28119752 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR7496472 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR5341412 Pre-XDR-TB lineage3 None
ERR987722 MDR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR9786671 Other None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR926157 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR4811030 Sensitive lineage4.9 None
ERR11082350 MDR-TB lineage4.6.2.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4816585 Other lineage2.2 None
SRR3675279 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR13278785 MDR-TB lineage4.6.2.2 None
ERR4799025 Other lineage4.8 None
SRR1184312 Other lineage2.2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR13264981 Sensitive La1.7;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR373945 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6789626 Other None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR29093909 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926163 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
DRR188519 Other lineage4.4.2 None
ERR363509 Sensitive lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR7535086 Other None
SRR26399265 Other lineage2.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR4812155 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR373947 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR13591342 HR-TB lineage4.1.1.3 None
ERR176740 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR12708416 Sensitive None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR29097037 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4817060 Other None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1184372 MDR-TB None
SRR6045555 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR926165 Sensitive lineage4.9 None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1173778 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR9787014 Other lineage6.1.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
ERR369151 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR1169194 Other lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR7496517 Other None
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675455 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR736848 Other lineage4.9 None
SRR1196494 MDR-TB None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR926160 Sensitive lineage4.9 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR400345 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR363449 Sensitive lineage4.9 None
SRR28119753 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR6358951 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR29096873 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR1184329 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
ERR212125 HR-TB lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR3675221 Other lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR2514692 Other None
ERR181824 HR-TB lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786440 Other lineage4.1 None
SRR3675477 Sensitive lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4818615 Sensitive None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4796577 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172310 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR6358755 Other lineage4.6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR6044875 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675214 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR13423649 Sensitive lineage2.2.1 None