Rv3596c - c.1368A>C
Drug resistance types
39 Sensitive
3 RR-TB
14 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.9 | 32 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.8 | 17 |
| lineage2.2.1 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.1.2.1;lineage4.8 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR28357667 | Sensitive | lineage4.8 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | SRR28389830 | Sensitive | lineage4.8 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR21595949 | Other | lineage4.8 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR13110331 | Sensitive | lineage4.8 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR29097019 | Sensitive | lineage4.8 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR1181349 | Sensitive | lineage4 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR26112475 | HR-TB | lineage4.8 | None | SRR6044835 | Other | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR21595941 | Other | lineage4.8 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR22248475 | Sensitive | lineage4.1.2.1;lineage4.8 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28381185 | Other | lineage4.8 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR30146977 | Other | lineage4.8 | None | ERR13259989 | MDR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR28381182 | Other | lineage4.8 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR29096179 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR29096740 | Sensitive | lineage4.8 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR10040301 | MDR-TB | lineage2.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6930935 | Pre-XDR-TB | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR29342480 | Sensitive | lineage4.8 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR29893822 | Other | lineage4.8 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None |
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