Rv3596c - c.1050G>C
Drug resistance types
7 Sensitive
3 RR-TB
28 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 42 |
| lineage2.2.1 | 9 |
| lineage2.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.2 | 3 |
| lineage3 | 1 |
| lineage4.8.1 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.8 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063849 | HR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4816656 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4819241 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None |
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