lineage | Count |
---|---|
lineage3 | 102 |
lineage3;lineage4 | 2 |
lineage4.9;lineage6.3 | 1 |
lineage4.9 | 2 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | SRR7069919 | Sensitive | lineage3 | None | ERR4819032 | Sensitive | lineage3 | None | SRR29056009 | Other | lineage3 | None | ERR4818083 | Sensitive | lineage3 | None | ERR330657 | Sensitive | lineage3;lineage4 | None | SRR7069797 | Sensitive | lineage3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096403 | Sensitive | lineage3 | None | SRR7069813 | Other | lineage3 | None | SRR18213889 | Other | lineage3 | None | ERR2514464 | Sensitive | lineage3 | gb | ERR13264960 | RR-TB | lineage3 | None | ERR3335783 | Sensitive | lineage3 | pk | ERR2510531 | Pre-XDR-TB | lineage3 | pk | SRR6153041 | Sensitive | lineage3 | ca | SRR6964632 | MDR-TB | lineage3 | None | ERR351902 | Sensitive | lineage3 | None | SRR2100053 | Sensitive | lineage3 | None | SRR2100666 | Sensitive | lineage3 | None | ERR4815032 | Sensitive | lineage3 | gb | ERR4815389 | Sensitive | lineage3 | gb | ERR4815496 | Other | lineage3 | gb | ERR4818497 | HR-TB | lineage3 | gb | ERR4819254 | Sensitive | lineage3 | gb | ERR3283042 | Other | lineage4.9 | None | ERR228110 | Other | lineage3 | None | ERR386798 | Sensitive | lineage3 | None | ERR688008 | Sensitive | lineage3 | None | ERR13291348 | Other | lineage3 | None | ERR11044314 | Other | lineage3 | None | SRR28046244 | HR-TB | lineage3 | None | ERR552556 | Sensitive | lineage3 | None | SRR28868480 | Other | lineage3 | None | ERR387063 | HR-TB | lineage3 | None | SRR29126286 | Sensitive | lineage3 | None | SRR12882611 | HR-TB | lineage3 | None | ERR230040 | Sensitive | lineage3 | None | SRR29440869 | Other | lineage3 | None | ERR4829171 | Other | lineage3 | it | ERR4407452 | Other | lineage3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR351866 | Sensitive | lineage3 | None | SRR24114342 | Pre-XDR-TB | lineage3 | None | ERR4829945 | MDR-TB | lineage3 | pk | SRR18213814 | Sensitive | lineage3 | None | SRR7070588 | Other | lineage3 | None | SRR2100329 | Sensitive | lineage3 | None | SRR2100967 | Other | lineage3 | None | ERR4830772 | RR-TB | lineage3 | ir | ERR4815769 | Other | lineage3 | gb | ERR4815833 | Sensitive | lineage3 | gb | ERR4819034 | Sensitive | lineage3 | gb | ERR4820562 | Other | lineage3 | gb | ERR2514045 | Sensitive | lineage3 | gb | ERR2513559 | Sensitive | lineage3 | gb | ERR2514135 | Sensitive | lineage3 | gb | ERR2514151 | Other | lineage3 | gb | ERR2514254 | Sensitive | lineage3 | gb | ERR2514300 | Sensitive | lineage3 | gb | ERR2514323 | Sensitive | lineage3 | gb | ERR2512664 | Other | lineage3 | gb | SRR6044963 | Other | lineage3 | gb | SRR5817467 | MDR-TB | lineage3 | au | ERR278596 | Other | lineage3 | None | SRR12882689 | Sensitive | lineage3 | None | SRR7070317 | Sensitive | lineage3 | None | SRR21733268 | Other | lineage3 | None | ERR4819820 | Other | lineage3 | None | ERR13289904 | Other | lineage3 | None | SRR6797621 | Sensitive | lineage3 | None | ERR11050455 | Other | lineage3 | None | SRR7070348 | Sensitive | lineage3 | None | ERR114481 | Sensitive | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR11067610 | Other | lineage3 | None | ERR4814682 | Sensitive | lineage3 | None | ERR270614 | Sensitive | lineage3 | None | SRR29126804 | Sensitive | lineage3 | None | SRR29231497 | Sensitive | lineage3 | None | ERR4818270 | Sensitive | lineage3 | None | SRR10147692 | RR-TB | lineage3 | None | SRR29126347 | Other | lineage3 | None | SRR28409561 | Other | lineage3 | None | SRR28868569 | Sensitive | lineage3 | None | ERR4817268 | Sensitive | lineage3 | None | ERR13093855 | Other | lineage3 | None | ERR386834 | Sensitive | lineage3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR17856681 | Sensitive | lineage3 | None | SRR28046083 | Other | lineage3 | None | ERR386955 | Other | lineage3 | None | ERR1034576 | Sensitive | lineage3 | pk | SRR21732619 | Other | lineage3 | None | SRR2099924 | Sensitive | lineage3 | None | SRR2100475 | Other | lineage3 | None | SRR2101095 | Sensitive | lineage3;lineage4 | None | SRR2101204 | Sensitive | lineage3 | None | SRR2101239 | Sensitive | lineage3 | None | ERR4829505 | Other | lineage3 | it | ERR2512414 | Other | lineage3 | gb | ERR2513171 | Other | lineage3 | gb | ERR2514001 | HR-TB | lineage3 | gb | ERR2514736 | Sensitive | lineage3 | gb | ERR11069082 | Sensitive | lineage3 | None | SRR6797477 | Other | lineage3 | None | SRR28045854 | Sensitive | lineage3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR12882678 | Sensitive | lineage3 | None | SRR12882762 | HR-TB | lineage3 | None |
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