Rv3457c - c.84G>C


Drug resistance types
36 Sensitive 10 RR-TB 45 HR-TB 32 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 179 Other
lineage Counts
lineage Count
lineage4.9 80
lineage4.8 9
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage2.2.1 2
lineage4.1.2.1 14
lineage3.1.1 1
La3;lineage2.2.2 2
lineage2.2.1 14
lineage1.1.3.2 1
lineage1.2.2.2 2
lineage2.1 5
23
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1;lineage4.1.2 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage3.1 1
lineage4.6.2.2 3
lineage4.2;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3 4
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 7
lineage4.1 1
lineage2.1;lineage4.9 14
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.3.3;lineage4.3.4.1 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
lineage4.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La3;lineage2 1
La2;lineage2.2 1
lineage1.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage1.1.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4 3
lineage6.3.1 3
La3;lineage4.9 2
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.2;lineage4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1.1.1 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.1.2.1.1 1
La3 2
lineage4.3.2.1 1
lineage4.8;lineage4.9 1
lineage1.1.3.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage6.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3 9
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2 1
lineage1.1.1 1
lineage4.1.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 1
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage6.2.3 1
lineage2.2 3
lineage4.6.1.1 1
La3;M.canetti;lineage2.2.1 1
La1.7;lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.9.1 1
lineage4.7 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7;lineage4.9 1
lineage4.2.1.1 1
lineage2.2.1;lineage3 1
La1.7;lineage3.1;lineage4 1
lineage4.2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage4.9 1
lineage4.3.2 1
lineage4.1.3 2
M.canetti;lineage2.1;lineage4.9 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage6.3 2
lineage4.8.1 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.4.1.1 1
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.2.BCG 1
lineage4.3.3 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1 1
La1.8.1 1
M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 308
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046133 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR502473 RR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR28119753 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR11466174 Other lineage4.8 None
ERR7821123 Other lineage1.1.3.2 None
SRR1165699 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
SRR28119777 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR1063849 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR9117709 Other None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
DRR474005 HR-TB lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR9786445 Other lineage4.8 None
SRR28119752 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR349266 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR1184294 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR28044634 Other lineage3 None
SRR1172857 Other None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4819781 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR363500 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786508 Sensitive lineage4.3.3;lineage4.3.4.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363453 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR1175074 Other None
ERR502481 RR-TB lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR18003019 Other lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR7496517 Other None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR3804162 Sensitive lineage6.3.1 None
ERR3797015 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4816999 Other None
SRR6045219 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4797588 MDR-TB lineage3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR6045399 Other M.canetti;lineage4.9 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341453 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR1175049 Other lineage4.8;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1172817 Other La3 None
SRR1172234 Other lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR6045706 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR29016780 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184381 MDR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR1173153 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR349264 Sensitive lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786671 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR363446 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
ERR4818615 Sensitive None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR9787061 Sensitive lineage6.2.3 None
ERR369162 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR369158 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR245758 Other lineage4.9.1 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
SRR1169194 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6789626 Other None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR2513470 Other lineage4.2.2.2 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR363474 Sensitive lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR29093909 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3283044 Other lineage4 None
SRR7535086 Other None
ERR363499 Sensitive lineage4.9 None
ERR9787223 Sensitive lineage6.3.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR373947 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR29050928 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR11068570 Other lineage4 None
SRR7496472 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR25827682 Other None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1184372 MDR-TB None
SRR6785227 Other lineage2.2.1 None
ERR9786604 Other None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1196583 Other lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341373 Other lineage4.9 None
SRR18213713 HR-TB None
ERR2514327 HR-TB lineage4.8 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR4821143 Other lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR502474 RR-TB lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1792478 HR-TB La1.7.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR1791747 Other La1.8.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4178309 Other lineage4.1.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR13285068 Sensitive lineage4.9 None
SRR1173218 Other lineage4.3.3 None
SRR1196494 MDR-TB None
ERR4816585 Other lineage2.2 None
ERR323107 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR1035157 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None