lineage | Count |
---|---|
La3;lineage4.9 | 8 |
lineage4.9 | 41 |
lineage2.2 | 3 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage4.1.2 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage2.2.1.2 | 2 |
La3;lineage4 | 1 |
La1;lineage4.9 | 2 |
lineage4.1.2.1 | 2 |
La1;lineage4.1.2 | 1 |
lineage3.1.2.1;lineage4 | 1 |
lineage2.2.1.2;lineage7 | 1 |
La1.7;lineage4.9 | 7 |
lineage2.2.1 | 2 |
lineage4 | 1 |
La1.2 | 2 |
M.canetti;lineage4.9 | 2 |
lineage3 | 1 |
lineage4.5 | 1 |
lineage6.1.3 | 1 |
La1.7 | 1 |
lineage4.8 | 1 |
M.canetti;lineage1 | 1 |
spoligotype | Count |
---|---|
None | 86 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR3283028 | Other | La3;lineage4 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4769427 | Other | La1.2 | None | ERR176741 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4799025 | Other | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None |
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