Rv2681 - c.1009_1011delCCG
Drug resistance types
119 Sensitive
9 RR-TB
36 HR-TB
36 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 64 |
| lineage4.1.2.1 | 25 |
| lineage1.1.2 | 6 |
| lineage4.1 | 12 |
| lineage2.2.2 | 3 |
| lineage4.5 | 3 |
| lineage3;lineage4.9 | 1 |
| lineage3 | 42 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1.1 | 6 |
| lineage4.2.1.1 | 8 |
| lineage4.7 | 1 |
| lineage4.3.1 | 1 |
| lineage4.9 | 3 |
| 1 | |
| lineage1.1.3.1;lineage3;lineage4.4.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.3 | 5 |
| lineage1.2.1.2.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.8 | 5 |
| lineage4.1.2.1;lineage4.2.1 | 1 |
| La1.8.1 | 3 |
| lineage3.1.1 | 2 |
| lineage6.1.3 | 3 |
| lineage4.3.2 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | 1 |
| La1.4 | 1 |
| lineage1.1.3 | 2 |
| La1.2 | 2 |
| lineage4.2.2 | 2 |
| lineage4.3.4.2 | 3 |
| lineage3;lineage4.3.3 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage3;lineage4.3.4.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.1.4 | 1 |
| La1.7.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10040365 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040303 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081777 | Sensitive | lineage4.1.2.1 | None | SRR28045735 | Sensitive | lineage1.1.2 | None | SRR20970065 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069405 | MDR-TB | lineage2.2.1 | None | ERR11044945 | Sensitive | lineage4.1 | None | SRR16088551 | MDR-TB | lineage2.2.1 | None | ERR552159 | Sensitive | lineage4.1 | None | ERR13284849 | MDR-TB | lineage2.2.2 | None | SRR19304021 | Sensitive | lineage4.1.2.1 | None | ERR13246210 | Sensitive | lineage4.5 | None | SRR28044567 | Other | lineage3;lineage4.9 | None | SRR29055894 | MDR-TB | lineage1.1.2 | None | ERR4798400 | MDR-TB | lineage3 | in | ERR10465989 | Sensitive | lineage4.2.2.2 | None | SRR16370214 | MDR-TB | lineage2.2.1 | None | ERR4798309 | Sensitive | lineage3 | in | SRR12882634 | Sensitive | lineage3 | None | ERR552872 | MDR-TB | lineage2.2.1 | None | ERR11050670 | Sensitive | lineage4.1.2.1 | None | ERR13439891 | HR-TB | lineage2.2.1 | None | SRR29772737 | MDR-TB | lineage1.1.2 | None | ERR13439892 | HR-TB | lineage2.2.1 | None | ERR4799894 | Other | lineage3 | in | ERR11067817 | Sensitive | lineage4.1.2.1 | None | SRR26399321 | Sensitive | lineage1.1.1.1 | None | SRR29464855 | Other | lineage1.1.1.1 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR9121485 | Sensitive | lineage4.1 | None | SRR10379981 | Other | lineage4.2.1.1 | None | ERR13266688 | HR-TB | lineage3 | None | SRR25515535 | Sensitive | lineage2.2.1 | None | SRR29914419 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277002 | Sensitive | lineage2.2.1 | None | SRR21277599 | Sensitive | lineage2.2.1 | None | SRR29440648 | Sensitive | lineage2.2.1 | None | DRR473805 | Sensitive | lineage2.2.1 | None | SRR14164920 | Sensitive | lineage4.7 | None | SRR28859993 | Sensitive | lineage4.3.1 | None | SRR30621307 | HR-TB | lineage4.9 | None | ERR4817072 | RR-TB | lineage3 | None | ERR4818475 | Sensitive | lineage3 | None | ERR4828316 | HR-TB | lineage2.2.1 | None | SRR24466766 | Sensitive | lineage4.1.2.1 | None | ERR4816200 | Sensitive | None | ERR4814764 | HR-TB | lineage3 | gb | ERR4816534 | Sensitive | lineage4.1.2.1 | gb | ERR4817903 | Sensitive | lineage4.1.2.1 | gb | ERR4821344 | Sensitive | lineage4.2.1.1 | gb | ERR2513143 | Sensitive | lineage3 | gb | ERR2514556 | Sensitive | lineage3 | gb | ERR2514624 | Sensitive | lineage3 | gb | ERR2514052 | Sensitive | lineage1.1.3.1;lineage3;lineage4.4.2 | gb | ERR2512688 | Sensitive | lineage3 | gb | ERR4831708 | MDR-TB | lineage2.2.1 | vn | ERR8699772 | Sensitive | lineage4.1.1.1 | None | ERR8699123 | Sensitive | lineage4.3.3 | None | ERR8699825 | Sensitive | lineage4.3.3 | None | SRR21732426 | Sensitive | lineage1.2.1.2.1 | None | ERR1035101 | Pre-XDR-TB | lineage1.1.1.1 | vn | SRR29053279 | Sensitive | lineage3.1.2.1 | None | SRR26399825 | Sensitive | lineage1.1.1.1 | None | SRR29050993 | HR-TB | lineage2.2.1 | None | SRR25515865 | MDR-TB | lineage2.2.1 | None | ERR4195763 | Sensitive | lineage4.8 | None | SRR10525342 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR5067221 | HR-TB | lineage2.2.1 | vn | ERR1213836 | MDR-TB | lineage2.2.1 | kr | ERR552874 | MDR-TB | lineage2.2.1 | None | SRR7617689 | Other | La1.8.1 | None | SRR30182694 | Sensitive | lineage2.2.2 | None | ERR4596907 | MDR-TB | lineage3.1.1 | None | SRR18511638 | Sensitive | lineage4.5 | None | SRR14782316 | Other | lineage4.2.1.1 | None | SRR25827860 | Other | lineage3 | None | ERR4832032 | HR-TB | lineage2.2.1 | vn | ERR4828259 | Other | lineage2.2.1 | None | ERR3803981 | Other | lineage6.1.3 | None | SRR28045228 | Sensitive | lineage3 | None | SRR21276950 | Sensitive | lineage2.2.1 | None | ERR2653074 | MDR-TB | lineage4.3.2 | None | SRR6797539 | HR-TB | lineage3 | None | SRR29772439 | MDR-TB | lineage4.8 | None | ERR4816079 | Sensitive | lineage4.1.2.1 | None | SRR28858386 | Sensitive | lineage3 | None | ERR5979508 | Sensitive | lineage4.1.2.1 | None | ERR4798906 | Sensitive | lineage3 | None | ERR13276209 | MDR-TB | lineage2.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR17657936 | MDR-TB | lineage2.2.1 | None | SRR7069040 | Sensitive | lineage3 | None | SRR6832492 | Sensitive | lineage4.2.1.1 | None | ERR4797942 | MDR-TB | lineage3 | in | SRR29051530 | Sensitive | lineage4.1.2.1 | None | SRR19392723 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | None | ERR1023257 | Other | lineage6.1.3 | None | ERR13093908 | RR-TB | lineage4.1.2.1 | None | ERR2815603 | Other | La1.4 | None | SRR23691357 | Sensitive | lineage2.2.1 | None | SRR7617692 | Other | La1.8.1 | None | SRR29050765 | HR-TB | lineage1.1.3 | None | ERR4407479 | Sensitive | lineage4.3.3 | None | ERR4407497 | Sensitive | lineage4.1.2.1 | None | SRR13583512 | Sensitive | lineage4.1.2.1 | None | ERR7911351 | MDR-TB | lineage4.1.2.1 | None | SRR7851374 | Other | La1.2 | None | DRR189020 | Sensitive | lineage4.2.2 | None | SRR10851590 | Sensitive | lineage4.3.4.2 | None | ERR4799987 | Sensitive | lineage3;lineage4.3.3 | None | DRR034409 | Sensitive | lineage4.8 | None | ERR11044612 | Sensitive | lineage4.1.2.1 | None | SRR14801865 | Other | lineage4.2.1.1 | None | SRR19428585 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 | None | SRR29050933 | HR-TB | lineage2.2.1 | None | SRR30211214 | Sensitive | lineage4.9 | None | SRR22048420 | Sensitive | lineage4.1 | None | DRR473687 | Sensitive | lineage2.2.1 | None | SRR28868686 | Other | lineage1.1.1.1 | None | ERR4407461 | HR-TB | lineage2.2.1 | None | ERR7911352 | MDR-TB | lineage4.1.2.1 | None | SRR6855776 | HR-TB | lineage4.3.4.2 | None | SRR10040454 | MDR-TB | lineage2.2.1 | None | ERR4815679 | Sensitive | lineage3 | None | ERR4819904 | Sensitive | lineage4.1.2.1 | None | SRR14164797 | HR-TB | lineage4.4.1.1 | None | ERR11044152 | MDR-TB | lineage2.2.1 | None | ERR2516918 | RR-TB | lineage3 | gb | ERR2516121 | Sensitive | lineage4.1 | es | ERR4815749 | Sensitive | lineage3 | gb | ERR4815968 | Sensitive | lineage4.1.2.1 | gb | ERR4817508 | Sensitive | lineage4.1.2.1 | gb | ERR4818760 | Sensitive | lineage3 | gb | ERR2512803 | Sensitive | lineage3 | gb | ERR2512868 | HR-TB | lineage3 | gb | ERR2514005 | RR-TB | lineage3 | gb | ERR2513544 | HR-TB | lineage3 | gb | ERR4831877 | HR-TB | lineage2.2.1 | vn | ERR4831895 | HR-TB | lineage2.2.1 | vn | ERR4832059 | HR-TB | lineage2.2.1 | vn | ERR4831942 | HR-TB | lineage2.2.1 | vn | ERR4832060 | HR-TB | lineage2.2.1 | vn | ERR4828178 | HR-TB | lineage1.1.3 | vn | ERR4828521 | HR-TB | lineage2.2.1 | vn | ERR4828574 | HR-TB | lineage2.2.1 | vn | ERR4828581 | HR-TB | lineage2.2.1 | vn | ERR4828527 | HR-TB | lineage2.2.1 | vn | ERR7911353 | MDR-TB | lineage4.1.2.1 | None | ERR11043745 | MDR-TB | lineage2.2.2 | None | ERR182056 | Sensitive | lineage4.3.4.2.1 | mw | ERR190343 | Sensitive | lineage3;lineage4.3.4.2.1 | mw | SRR6832366 | Other | lineage4.2.1.1 | None | SRR12882715 | Sensitive | lineage3 | None | SRR26399737 | Other | lineage2.2.1 | None | SRR5074152 | Sensitive | lineage1.1.1.1 | vn | ERR4815588 | RR-TB | lineage3 | None | ERR552160_ERR552159 | Other | lineage4.1 | None | ERR9786414 | Sensitive | lineage4.1 | None | ERR552160 | Sensitive | lineage4.1 | None | ERR2660434 | Sensitive | lineage1.1.3.2 | None | ERR3256158 | Sensitive | lineage1.2.1.2.1 | ph | SRR7069096 | Sensitive | lineage3 | None | SRR26399988 | HR-TB | lineage2.2.1 | None | ERR13252804 | Sensitive | lineage4.2.2 | None | SRR23340134 | HR-TB | lineage4.3.3 | None | SRR29016742 | HR-TB | lineage2.2.1 | None | SRR3544723 | Sensitive | lineage4.1 | None | ERR11067571 | Sensitive | lineage4.1.2.1 | None | ERR1199086 | Sensitive | lineage4.6.1.1 | ug | SRR29017315 | HR-TB | lineage2.2.1 | None | SRR19324957 | Sensitive | lineage3.1.2.1 | None | SRR29050654 | HR-TB | lineage2.2.1 | None | SRR29017489 | HR-TB | lineage2.2.1 | None | SRR29231013 | Sensitive | lineage4.3.4.2 | None | ERR4797327 | Sensitive | lineage3 | in | ERR11081725 | Sensitive | lineage4.1.2.1 | None | SRR30182663 | Sensitive | lineage3 | None | SRR12882126 | Sensitive | lineage3.1.1 | None | ERR13439876 | HR-TB | lineage2.2.1 | None | SRR29539740 | Sensitive | lineage4.2.1 | None | SRR28860112 | Sensitive | lineage2.2.1 | None | SRR12882760 | Sensitive | lineage1.1.2 | None | ERR3132288 | MDR-TB | lineage2.2.1 | None | SRR29231257 | Sensitive | lineage3 | None | ERR13267072 | Sensitive | lineage4.8 | None | SRR6831714 | Sensitive | lineage4.2.1.1 | None | ERR4799871 | MDR-TB | lineage3 | in | SRR15316067 | Sensitive | lineage2.2.1 | None | ERR4195854 | Sensitive | lineage4.1 | None | ERR11068528 | Sensitive | lineage3 | None | SRR29016763 | Other | lineage2.2.1 | None | ERR9787120 | Other | lineage6.1.3 | None | ERR552873_ERR552872_ERR552874 | MDR-TB | lineage2.2.1 | None | ERR13439893 | HR-TB | lineage2.2.1 | None | ERR552873 | MDR-TB | lineage2.2.1 | None | ERR11044946 | Sensitive | lineage4.1 | None | SRR16157124 | RR-TB | lineage4.1.1.3 | None | SRR30182626 | Sensitive | lineage1.1.3.1 | None | SRR7068999 | RR-TB | lineage3 | None | ERR11068653 | Sensitive | lineage4.1.2.1 | None | DRR188509 | Other | lineage4.5 | None | SRR30527365 | Sensitive | lineage4.9 | None | SRR28044527 | Sensitive | lineage3 | None | ERR7911144 | MDR-TB | lineage2.2.1 | vn | ERR7911167 | MDR-TB | lineage2.2.1 | vn | ERR4797863 | Sensitive | lineage3 | in | ERR4798548 | Sensitive | lineage4.1.4 | in | ERR552717 | Sensitive | lineage3 | de | SAMEA2534973 | MDR-TB | lineage2.2.1 | uz | ERR553208 | MDR-TB | lineage2.2.1 | uz | SAMEA2534452 | Sensitive | lineage4.1 | None | SRR2100425 | Sensitive | lineage1.1.2 | None | ERR1193762 | Sensitive | lineage4.3.3 | np | ERR4817019 | Sensitive | lineage4.1.2.1 | gb | ERR2513464 | Other | lineage3 | gb | ERR2514334 | Sensitive | lineage3 | gb | ERR2515277 | RR-TB | lineage4.1.1.3 | za | ERR144630 | Sensitive | lineage2.2.1 | ru | ERR4828669 | HR-TB | lineage2.2.1 | None | ERR1952142 | MDR-TB | lineage1.1.2 | ie | ERR245808 | Sensitive | lineage4.3.4.2.1 | mw | SRR10525347 | Sensitive | lineage4.1.2.1 | None | SRR1792058 | Other | La1.8.1 | None | SRR18391679 | Sensitive | La1.7.1 | None | SRR14781912 | Other | lineage4.2.1.1 | None | ERR182036 | Sensitive | lineage4.3.4.2.1 | mw | ERR176691 | Sensitive | lineage4.3.4.2.1 | mw | ERR13262046 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR5074123 | MDR-TB | lineage2.2.1 | vn | SRR7851350 | Other | La1.2 | None | ERR9121324 | Sensitive | lineage4.8 | None | ERR2515670 | RR-TB | lineage4.1.1.3 | None |
|---|
