Rv2681 - c.-131A>G
Drug resistance types
35 Sensitive
5 RR-TB
16 HR-TB
9 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 20 |
| lineage4.4.2 | 35 |
| lineage4.9 | 8 |
| M.canetti;lineage2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.2.BCG | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| 1 | |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4195557 | Sensitive | lineage4.3.2 | None | SRR25515459 | Other | lineage4.4.2 | None | SRR6046878 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR25515088 | Other | lineage4.4.2 | None | ERR2517535 | Sensitive | lineage4.3.2 | nl | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR2446455 | Sensitive | lineage4.3.2 | nl | SRR6045053 | Other | lineage4 | None | SRR25515231 | Sensitive | lineage4.4.2 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR25534147 | Sensitive | lineage4.4.2 | None | ERR4769450 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR6865366 | Sensitive | lineage4.3.2 | None | SRR25515009 | Sensitive | lineage4.4.2 | None | SRR25515834 | MDR-TB | lineage4.4.2 | None | ERR4178128 | Sensitive | lineage4.3.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR13423654 | HR-TB | lineage4.4.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR751485 | MDR-TB | lineage4.3.2 | pe | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR2516581 | Sensitive | lineage4.3.2 | pe | SRR6824347 | RR-TB | lineage4.4.2 | cn | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR25515087 | Other | lineage4.4.2 | None | SRR25515850 | Sensitive | lineage4.4.2 | None | ERR2179644 | RR-TB | lineage4.4.2 | cn | SRR25515678 | Other | lineage4.4.2 | None | DRR473738 | Sensitive | lineage2.2.1 | None | SRR10808492 | Sensitive | lineage4.3.2 | None | ERR3275245 | Sensitive | lineage4.3.2 | nl | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR25515080 | HR-TB | lineage4.4.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR25515496 | Other | lineage4.4.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR25534263 | Sensitive | lineage4.4.2 | None | SRR26112058 | Sensitive | lineage4.4.2 | None | SRR21676316 | Sensitive | lineage4.3.2 | None | ERR4811738 | Sensitive | lineage4.3.2 | pe | ERR4195229 | Sensitive | lineage4.3.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR25515612 | Sensitive | lineage4.4.2 | None | SRR25515696 | Other | lineage4.4.2 | None | ERR6359082 | Other | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212001 | HR-TB | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2184514 | Sensitive | lineage4.3.2 | pe | SRR15316468 | HR-TB | lineage4.4.2 | None | ERR9121606 | Sensitive | lineage4.3.2 | None | ERR3283042 | Other | lineage4.9 | None | SRR25514981 | Pre-XDR-TB | lineage4.4.2 | None | SRR25534218 | Sensitive | lineage4.4.2 | None | SRR1723976 | RR-TB | lineage4.4.2 | cn | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4024573 | Sensitive | lineage4.3.2 | None | ERR13292261 | Sensitive | lineage4.4.2 | None | SRR25514903 | Other | lineage4.4.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR25515680 | Other | lineage4.4.2 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR15316412 | HR-TB | lineage4.4.2 | None | ERR6866400 | Sensitive | lineage4.3.2 | None | SRR18911131 | Sensitive | lineage4.4.2 | None | SRR25534214 | Other | lineage4.4.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR25515662 | Sensitive | lineage4.4.2 | None | SRR29053419 | Sensitive | lineage4.3.2 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR25515553 | Sensitive | lineage4.4.2 | None | ERR9121183 | Sensitive | lineage4.3.2 | None | SRR25515059 | Sensitive | lineage4.4.2 | None | ERR4195322 | Sensitive | lineage4.3.2 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR25514924 | Sensitive | lineage4.4.2 | None | ERR6865926 | Sensitive | lineage4.3.2 | None | ERR502959 | RR-TB | lineage4.4.2 | None | SRR25515499 | Other | lineage4.4.2 | None | SRR25514943 | Sensitive | lineage4.4.2 | None |
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