Rv1908c - c.993T>C
Drug resistance types
14 Sensitive
0 RR-TB
16 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti | 9 |
| lineage4.9 | 12 |
| La1.2.BCG | 1 |
| 2 | |
| lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.2.1 | 1 |
| M.canetti | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1336821 | Sensitive | La3;M.canetti | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR987722 | MDR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR926165 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR19612376 | Sensitive | lineage2.2.1 | None | ERR926163 | Other | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR266124 | Other | M.canetti | None | ERR1043164 | Other | La3;M.canetti | None | ERR266123 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | ERR926158 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1043163 | Other | La3;M.canetti | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
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