Rv1630 - c.804C>T
Drug resistance types
62 Sensitive
20 RR-TB
36 HR-TB
22 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 80 |
| lineage4.3.4.2 | 2 |
| La1.7;lineage4.9 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage3 | 6 |
| lineage1.2.2.2 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.8 | 14 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 17 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.7 | 1 |
| La1.8.1 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 4 |
| lineage3;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage6.1.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4 | 2 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.1 | 1 |
| lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| 1 | |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 195 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801749 | HR-TB | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR29096878 | Other | lineage1.2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4553558 | RR-TB | lineage1.2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR978727 | Other | lineage4.8 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR7070223 | HR-TB | lineage3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6650321 | Sensitive | lineage1.2.2.2 | None | SRR3675552 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR29017396 | MDR-TB | lineage1.2.2.2 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR11465665 | Other | lineage4.1.1.3 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR2512606 | HR-TB | lineage3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4820266 | Sensitive | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None |
|---|
