Rv1630 - c.684C>G


Drug resistance types
14 Sensitive 38 RR-TB 72 HR-TB 51 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.8 14
lineage4.1.2.1 10
La1.8.1 5
lineage4.9 71
lineage3 6
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 21
M.canetti;lineage4.6.4;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4 1
lineage2.2.1 10
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7;lineage4.9 3
La3;M.canetti;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.5 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.3.3 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage4.9;lineage9 2
lineage4.6.1.2 4
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.4.2 1
lineage3.1.1;lineage4.9 1
lineage2.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage2.2 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage4.4.1.1 3
lineage4.3.4.2 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 2
lineage4.3.4.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2 2
M.canetti;lineage2.1;lineage4 1
lineage2.2.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
La1.2 1
M.canetti;lineage2.2 1
La1.2;La1.8.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.9;lineage7 1
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage1.1 1
3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.3.4.2.1 1
lineage3.1;lineage9 1
lineage4.5 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 1
lineage2.2;lineage4 1
La1.7 1
lineage4.3.2.1 2
lineage4.1.1.3 1
lineage1.1.2;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.8;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.2 1
La3;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage3.1 1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 275
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786639 Sensitive lineage4.8 None
ERR2446118 Other lineage4.1.2.1 nl
SRR11462861 Other La1.8.1 None
SRR3675243 Other lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1735596 RR-TB lineage4.9 None
ERR8665994 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6359066 HR-TB lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR6045347 Other lineage4.9 None
ERR4821704 Other lineage4.3.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
DRR188519 Other lineage4.4.2 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1196545 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR29096150 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR502470 RR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR736831 Other lineage4.9 None
SRR29097037 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR5431730 Other La1.8.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR1172310 HR-TB lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR6044875 Sensitive lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR5535933 Other lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR4769427 Other La1.2 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR978752 Other lineage4.8 None
SRR6045548 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR14782054 Other lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2446566 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR1791696 Other La1.8.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3797062 RR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR176740 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR987722 MDR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR3797023 HR-TB La1.8.1 None
ERR4798823 HR-TB lineage4 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR752229 Other lineage4.5 None
ERR3468607 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4815079 RR-TB lineage3 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR7240476 Other La1.8.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
ERR176741 Other lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR4830353 Other La1.7 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR978762 Other lineage4.8 None
SRR5341330 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR22424787 Sensitive lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR2228890 Other lineage4.8;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR4769452 Other lineage4.9 None
ERR978735 Other lineage4.8 None
SRR21732954 Sensitive lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR20970016 Other lineage2.2 None
SRR13861400 Other lineage4.9 None
SRR13861553 Other lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR4817069 RR-TB None
ERR978757 RR-TB lineage4.8 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2509673 Other lineage2.2.1 None
ERR4769497 Other La1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045555 Other lineage4.9 None