Rv1630 - c.561T>C


Drug resistance types
113 Sensitive 37 RR-TB 159 HR-TB 84 MDR-TB 15 Pre-XDR-TB 2 XDR-TB 255 Other
lineage Counts
lineage Count
lineage2.2.1 35
lineage2.1;lineage4.9 18
lineage4.1.2.1 22
lineage4.9 227
lineage2.2;lineage4 1
lineage2.1;lineage4.9;lineage6.3 10
lineage1.2.1.1 1
lineage4.3.2.1 2
lineage6.1.3 2
La3;lineage4.9 17
lineage4 7
lineage4.6.1.2 5
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.9 25
lineage4.1.1.2 1
lineage4.1.1.1 4
lineage4.1.1.3 3
La3;lineage2.2.1 1
La3;lineage4.3.4 1
La1.7;lineage4.9 11
La1;lineage2;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
La3;lineage2.2.2 1
lineage2.2.2;lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.9 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
22
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3 12
lineage4.1.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1 5
lineage4.4.1.1.1 2
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.8 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 2
lineage6.1.1 2
lineage2.2 5
lineage4.1.2.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
lineage3.1.3 2
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
lineage5.2 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.2 2
lineage4.3.4.1 3
lineage4.9;lineage6.3 9
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.2 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage4.2.2.2 2
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9;lineage9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.8.1 4
lineage4.2.1 3
lineage1.2.2.2 1
lineage4.3.4.2.1 3
lineage4.1.2.1.1 1
lineage4.6.2.2 5
lineage4.4.1.2 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.1.2 3
lineage4.9;lineage7 4
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2;lineage4 1
lineage2.2.1.1 4
lineage1.1 1
La1.2.BCG 2
lineage4.6.3;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 2
lineage1.2.1.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2;lineage4.9 1
lineage4.8 11
La2;lineage4.9 2
lineage2.2.1;lineage3 1
lineage1;lineage4.9 1
lineage2.2.1;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.3 2
La1.2.BCG;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.2.1;lineage3;lineage4 1
lineage1.1.3.1 1
La3 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1.2.1 1
lineage4.9.1 1
lineage3.1 1
La1.4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1 1
lineage4.8;lineage4.9 2
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.9 1
lineage4.3.3;lineage4.3.4.1 1
La1.2.BCG;La1.8.1 1
La1.7;lineage4.9;lineage6 1
lineage6.3.1 1
lineage2.2.2 1
lineage4.7 2
La3;lineage1.1.2 1
La3;M.canetti;lineage4.9 2
lineage4.6.5 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1.1.1 1
lineage4.8.1 1
lineage3.1;lineage9 1
lineage2.2.1.2;lineage7 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage4 1
M.canetti;lineage2.1;lineage4 1
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 665
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969731 Other lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR14782054 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR3797015 HR-TB lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR29016901 Other La3;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR9786617 Other lineage4.1.1.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR124636 Sensitive lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR28119753 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR4819933 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4596902 MDR-TB lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799378 Sensitive lineage4.9 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR702406 Other lineage2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR6046594 Sensitive lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR4799513 HR-TB lineage2.2 None
SRR28119752 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7496472 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR3675221 Other lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
SRR12142341 HR-TB lineage2.1 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR4816585 Other lineage2.2 None
SRR1049672 Other lineage3 None
ERR369161 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR11342682 Other lineage4.1.2 None
SRR5341293 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR1169249 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816964 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
SRR6789626 Other None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
ERR3273109 HR-TB lineage4 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR751326 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR926159 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR4596910 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR9117709 Other None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341308 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR16156697 RR-TB lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR29050928 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961549 Other La1.2 None
SRR6045892 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR29017081 Sensitive lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR3675312 Sensitive lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR29097037 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR4817069 RR-TB None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341387 Other lineage4.9 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR234659 Other None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4818536 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6045555 Other lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR3675243 Other lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR15368973 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4818561 Sensitive lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR212123 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29050859 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR29093909 Other lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR29051093 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR23961542 Other La1;lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR4872094 MDR-TB lineage5.2 None
ERR4814976 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR926154 Sensitive lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR28119777 Other lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR176643 Other La3;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR3675246 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR29096150 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR176751 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR29097026 Other lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4769452 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR037504 Other lineage4.9.1 None
SRR1184346 HR-TB lineage3.1 None
ERR323085 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR16278274 Other La1.4 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR5341299 HR-TB lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR10796636 Other lineage4.1.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28351339 MDR-TB lineage4 None
ERR212001 HR-TB None
SRR28119805 Other lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6044815 Other lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR16156804 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4815752 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4816322 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926157 Sensitive lineage4.9 None
ERR9786508 Sensitive lineage4.3.3;lineage4.3.4.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR400529 Other lineage3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3468607 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR10796565 Other lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR6044875 Sensitive lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR369151 Other lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045191 Sensitive lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6045053 Other lineage4 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
SAMEA3501073 RR-TB lineage4.8 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1158918 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR137286 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5341373 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3416776 Other lineage2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR7496517 Other None
ERR4820773 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR5341310 Other lineage1.1.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR7240492 HR-TB La1.7.1 None
SRR7496523 Other lineage4.7 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1167384 Other La3;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816762 Sensitive lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28351584 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4819357 Sensitive lineage4.9 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR10315556 Sensitive lineage2.2.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR387051 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180440 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR1063896 Sensitive None
SRR1710057 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9787336 RR-TB lineage6.1.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1915479 Other La1.2.BCG None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR18003019 Other lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1169194 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18909918 Other lineage2.2.1.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None