Rv1630 - c.1215G>A
Drug resistance types
66 Sensitive
4 RR-TB
43 HR-TB
14 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.9 | 98 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1 | 9 |
| lineage4.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage3 | 2 |
| lineage2.2 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.9 | 6 |
| lineage1.2.1.1 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.2 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage4.9;lineage9 | 1 |
| La1;lineage4.9 | 3 |
| M.canetti;lineage4.9 | 5 |
| lineage1.1.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| 1 | |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4 | 5 |
| La1.8.1 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 199 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR28351347 | Other | lineage3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR6358979 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR29096425 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR29096717 | Sensitive | lineage4.9 | None | SRR29097023 | Sensitive | lineage4.9 | None | SRR29096107 | Sensitive | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR867566 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR29097054 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR29096166 | Sensitive | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR29096943 | Sensitive | lineage3.1.2.1 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR29096410 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
|---|
