Rv0682 - c.279G>T
Drug resistance types
18 Sensitive
2 RR-TB
16 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 23 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3 | 4 |
| lineage1.2.1.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1 | 11 |
| lineage3.1.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.1.1.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage5 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821811 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR736831 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR9896144 | Other | lineage3 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None |
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