Rv0668 - c.969G>A


Drug resistance types
34 Sensitive 7 RR-TB 49 HR-TB 23 MDR-TB 5 Pre-XDR-TB 4 XDR-TB 187 Other
lineage Counts
lineage Count
lineage4.9 71
23
lineage6.1.3 3
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 5
lineage4.6.1.1 2
La1.7;lineage4.9 8
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9;lineage6.3 8
La3;lineage2.1;lineage4.9 3
lineage4.3.4.2.1 3
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9;lineage6.3 9
lineage2.1 5
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1 16
La2;lineage2.2 1
lineage2.2 3
lineage1.1.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1;lineage4 1
lineage4.3.3 2
lineage2.1;lineage4.9 15
lineage3 3
lineage3.1.2 1
lineage4.9;lineage7 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 9
La1.7 2
lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.4.1.1 3
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
lineage4.6.2.2 3
lineage4.1.1.1 3
La3;lineage2.2.1 2
lineage2.2.2;lineage4 1
La3;lineage2.2.2 2
lineage4.3.4.2 1
lineage4 3
La3 2
lineage4.1.3 2
lineage4.4.1.2 1
lineage2.1;lineage6.3 2
lineage4.3.4.1 3
M.canetti;lineage2.1;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.1.2.1 12
La1.7;M.canetti;lineage4.9 5
lineage4.1;lineage4.8 2
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage2.2 2
La1.2.BCG;La1.8.1 1
lineage3.1;lineage9 1
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage2 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage4.1.1.3 2
lineage4.7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage1.1.2 1
La3;M.canetti;lineage4.9 1
lineage1.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 3
lineage2.2.1;lineage3 1
La1.6;La3;lineage4.9 1
La1.2;La1.8.1 1
lineage3.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.2.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.2.1 1
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 309
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29096541 Other lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4818929 HR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR1196583 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR387051 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR7496517 Other None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR4816585 Other lineage2.2 None
SRR3675279 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1169249 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR212123 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR29051077 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR29016901 Other La3;lineage4.9 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR28119753 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR6046245 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29096900 Sensitive lineage4.3.4.2 None
ERR3283044 Other lineage4 None
ERR990545 Other lineage3 None
SRR6046564 Sensitive lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR7496509 Other None
ERR176751 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR1023236 Other lineage6.1.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR7821163 Other lineage2.2.1 None
SRR1184294 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR9786843 Other None
SRR25827682 Other None
ERR9787197 Other None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR21690574 Other lineage4.1.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR19295647 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1184372 MDR-TB None
ERR4815752 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR1196768 MDR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675222 Other La1.7 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR176557 Sensitive lineage4.3.4.1 None
SRR1175074 Other None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR12708384 Sensitive lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675455 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR161037 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675582 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR29093909 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR29017461 Other La3;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR6785268 Sensitive lineage4.2.1 None
ERR3283032 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
ERR4812155 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
ERR4816656 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
SRR1173400 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1034634 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
SRR28119752 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR9787030 RR-TB lineage6.1.2 None
SRR7496472 Other lineage4.9 None
SRR12708416 Sensitive None
ERR4816151 Sensitive lineage4.8 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR502912 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR212001 HR-TB None
SRR1172857 Other None
ERR212033 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR11465024 Other lineage4.1.1.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786604 Other None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675572 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None