Rv0668 - c.61_63delAGGinsCGT
Drug resistance types
35 Sensitive
1 RR-TB
18 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9 | 41 |
| La1.8.1 | 1 |
| 1 | |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 6 |
| La1;lineage2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4830353 | Other | La1.7 | None | ERR4798099 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None |
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