Rv0668 - c.1428G>C
Drug resistance types
85 Sensitive
26 RR-TB
72 HR-TB
23 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 134 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage4.2;lineage4.9 | 3 |
| La1.6 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4.2.1 | 6 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.8 | 10 |
| lineage2.2.1;lineage4 | 1 |
| lineage3 | 11 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.1 | 16 |
| La1.7;lineage4.9 | 2 |
| lineage4.8.1 | 1 |
| La1.8.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.1.2.1 | 3 |
| lineage1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage6.1.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| La1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| 2 | |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.3 | 4 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7.1 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.1.2 | 3 |
| lineage2.2.2 | 4 |
| M.canetti;lineage1 | 1 |
| lineage4.4.2 | 1 |
| La1.3 | 2 |
| M.canetti;lineage4.9 | 4 |
| lineage2;lineage4 | 1 |
| La1.2.BCG | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.4 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 281 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180312 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1180345 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2513259 | Other | lineage3 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR926163 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4798139 | RR-TB | lineage1.1.2 | None | ERR3468488 | Other | La1.8.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4796577 | HR-TB | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR176651 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR16157123 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29051043 | Other | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR5341373 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR29772570 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None |
|---|
