Rv0668 - c.1411_1413delAGCinsTCG
Drug resistance types
9 Sensitive
12 RR-TB
17 HR-TB
19 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| La1.3 | 2 |
| La1.8.1 | 1 |
| lineage3 | 6 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.2.1 | 1 |
| La1.6 | 1 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 11 |
| lineage4.4 | 1 |
| lineage4.3.3 | 3 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.2 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 5 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323037 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR3468488 | Other | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1173770 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1023509 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR2432997 | Other | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR1049672 | Other | lineage3 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4769514 | Other | La1.3 | None | ERR736831 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1173170 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None |
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