Rv0668 - c.-317_-315delTTGinsCTC
Drug resistance types
34 Sensitive
5 RR-TB
6 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 38 |
| lineage3.1.3 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4 | 2 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 2 |
| lineage4.3.3 | 1 |
| La1.7.1 | 2 |
| lineage3 | 3 |
| lineage4.8 | 4 |
| La3;lineage4.9 | 4 |
| La1.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4 | 1 |
| 2 | |
| lineage4.3.4.2 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797065 | RR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4821747 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR4816852 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4814976 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None |
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