Rv0667 - c.1395G>A
Drug resistance types
15 Sensitive
13 RR-TB
16 HR-TB
19 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 37 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 5 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7 | 2 |
| lineage4.8 | 2 |
| lineage2.2.1 | 9 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1.8.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 118 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769554 | RR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1023509 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5431730 | Other | La1.8.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4820112 | Sensitive | lineage4.1.1.1 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR14782054 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675222 | Other | La1.7 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19612362 | Sensitive | lineage2.2.1 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR21279438 | Sensitive | lineage2.2.1 | None |
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