Rv0639 - c.219T>G


Drug resistance types
164 Sensitive 4 RR-TB 65 HR-TB 16 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.9 220
lineage2.2.1 12
La1.2.BCG 1
M.canetti;lineage4.9 2
lineage4.2;lineage4.9 2
lineage2.2 3
La1.7;lineage4.9 7
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
lineage4.1.1.3;lineage4.9 2
lineage1;lineage4.9 1
La3;lineage4.9 6
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1;lineage4.9 2
lineage4.5 1
lineage4.8 3
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
3
lineage4.2;lineage4.6.3;lineage4.9.1 2
La2;lineage4.9 1
lineage4.1.2.1 6
lineage2.2.1;lineage4 2
lineage3 5
lineage4.9;lineage9 2
lineage4.3.2.1 2
lineage4.3.4.2 1
lineage4 7
lineage4.9;lineage6.3 2
lineage4.2.1 2
lineage4.3.4.2.1 2
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 2
lineage5.1.4 1
lineage1.1.1 1
lineage4.6.3;lineage4.9 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
lineage4.4.1.1.1 1
lineage4.1.2 1
La1;lineage2;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1;lineage4.9 3
La1.7;M.canetti;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.6.2.2 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.3 1
lineage2;lineage4.9 1
lineage1.1.2 1
lineage2.1;lineage4.9 1
lineage1.2.1.1 1
lineage4.4.1.1 1
La1.7;lineage3.1;lineage4 1
lineage4.1.1.2 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.4.2 1
La2;lineage4.9;lineage9 1
lineage1.1.3.1 1
lineage3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 346
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR349296 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1180996 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR369159 Sensitive lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1180355 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4811030 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR2514327 HR-TB lineage4.8 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR29096882 Sensitive lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369163 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR369158 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR702405 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR1165628 Other La3;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR736848 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR11662694 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR6046802 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR26399265 Other lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR4799378 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1175512 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
ERR3283018 HR-TB lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR363456 Sensitive lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR1172310 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180375 Sensitive lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6044780 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675279 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR5341366 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR161037 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR29096530 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR363445 Other lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR176751 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR176740 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR1181402 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
SRR5341387 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR137286 Other lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR323066 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4817998 Other lineage3 None
SRR28351347 Other lineage3 None
SRR1175496 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1180391 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR3675265 Other lineage4 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675522 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363490 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
SRR29096710 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1169249 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR6359066 HR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR29096448 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR212123 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR29097058 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR29050859 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR29096394 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1180319 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR12708372 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR369160 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR363502 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR1180399 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None