Rv0639 - c.171G>T
Drug resistance types
63 Sensitive
4 RR-TB
21 HR-TB
11 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;lineage4 | 1 |
| lineage4.9 | 83 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4 | 3 |
| lineage2.2.1 | 5 |
| La1.7.1;lineage4.9 | 1 |
| lineage3;lineage4.2.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 2 |
| 1 | |
| lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.1.2.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.8 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR736848 | Other | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4798776 | Sensitive | lineage3;lineage4.2.2 | in | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR29096394 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR926163 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR373947 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4820112 | Sensitive | lineage4.1.1.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR349299 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR29096530 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None |
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