Rv0565c - c.-138_-137insCA
Drug resistance types
0 Sensitive
2 RR-TB
12 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 7 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 4 |
| lineage4.1.1.1 | 1 |
| 3 | |
| lineage4.3.2 | 1 |
| lineage2.1 | 3 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage4.8 | 1 |
| La3;lineage2 | 1 |
| lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 1 |
| La3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4816585 | Other | lineage2.2 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR28119753 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR3675236 | Other | None | ERR9117805 | Other | lineage4.3.2 | None | ERR702406 | Other | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184372 | MDR-TB | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None |
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