Rv0529 - c.918T>C
Drug resistance types
69 Sensitive
2 RR-TB
28 HR-TB
13 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 65 |
| La3;M.canetti | 3 |
| lineage4.9 | 32 |
| La1.7;lineage4.9 | 7 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La2;M.canetti | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR266121 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | SRR5341373 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR16058668 | Sensitive | M.canetti | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4815361 | Other | M.canetti | None | SRR6650709 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736848 | Other | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR10177259 | Other | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | SRR29097004 | Other | lineage3 | None | ERR552307 | Sensitive | M.canetti | None | ERR3597006 | Other | La3;M.canetti | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR551057 | Other | M.canetti | None | ERR9125480 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR5818652 | Sensitive | M.canetti | dj | ERR266109 | Sensitive | M.canetti | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR24061598 | Sensitive | M.canetti | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | SRR22179528 | Sensitive | M.canetti | None | SRR24061599 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR551179 | Sensitive | M.canetti | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3797029 | Other | lineage4.9 | None | ERR3597001 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR552304 | Sensitive | M.canetti | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR266107 | Other | M.canetti | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5818614 | Sensitive | M.canetti | dj | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR551056 | Sensitive | M.canetti | None | ERR266110 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | ERR13265488 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR266106 | Sensitive | M.canetti | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR18289195 | Sensitive | M.canetti | None | SRR5818653 | Sensitive | M.canetti | dj | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR16058674 | Other | M.canetti | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR10177258 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR7451301 | Sensitive | M.canetti | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | ERR4769452 | Other | lineage4.9 | None | SRR10177260 | Other | M.canetti | None | ERR266124 | Other | M.canetti | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR266123 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3597004 | Sensitive | M.canetti | None | SRR5818567 | Other | M.canetti | dj | SRR10522763 | Sensitive | M.canetti | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR266108 | Sensitive | M.canetti | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3597002 | Other | M.canetti | None | SRR16156817 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR13265388 | Sensitive | lineage2.2.1 | None | ERR313115 | Other | M.canetti | None | SRR29050859 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3597007 | Sensitive | M.canetti | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | ERR971389 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR10177263 | Sensitive | M.canetti | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR552305 | Sensitive | M.canetti | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR5818676 | Other | M.canetti | dj | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR10177262 | Sensitive | M.canetti | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4817181 | Sensitive | M.canetti | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR313114 | Sensitive | M.canetti | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None |
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