Rv0010c - c.-71T>C
Drug resistance types
85 Sensitive
3 RR-TB
27 HR-TB
70 MDR-TB
63 Pre-XDR-TB
3 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 18 |
| lineage4.1.2 | 2 |
| lineage2.2.1 | 146 |
| lineage4.1.2.1 | 11 |
| lineage4.8 | 34 |
| lineage4.3.3 | 1 |
| lineage1.2.1 | 1 |
| lineage2.2.1.1 | 6 |
| lineage3.1.1 | 3 |
| lineage1.1.2 | 6 |
| lineage4.2.2 | 3 |
| lineage4.7 | 6 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.5 | 8 |
| lineage4.3.2 | 2 |
| lineage2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.1.4 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| La1.5;lineage4.5 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 4 |
| lineage1.2.2.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 272 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799706 | Sensitive | lineage3 | in | ERR2184368 | Other | lineage4.1.2 | None | SRR25207361 | MDR-TB | lineage2.2.1 | None | ERR13290597 | MDR-TB | lineage2.2.1 | None | SRR1163219 | MDR-TB | lineage2.2.1 | None | SRR29124262 | Sensitive | lineage4.1.2.1 | None | SRR22048318 | Sensitive | lineage4.1.2.1 | None | ERR13267705 | Sensitive | lineage4.1.2.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR14807471 | MDR-TB | lineage2.2.1 | None | SRR26112260 | Other | lineage4.8 | None | ERR13265956 | Sensitive | lineage2.2.1 | None | SRR6785279 | MDR-TB | lineage4.3.3 | None | SRR6831835 | MDR-TB | lineage2.2.1 | None | ERR4798677 | XDR-TB | lineage2.2.1 | in | ERR13290595 | MDR-TB | lineage2.2.1 | None | SRR28239892 | Sensitive | lineage4.8 | None | ERR4195273 | Sensitive | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR29440891 | Sensitive | lineage1.2.1 | None | ERR13281464 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284368 | Pre-XDR-TB | lineage4.8 | None | SRR19303978 | Sensitive | lineage4.1.2.1 | None | SRR29772614 | MDR-TB | lineage2.2.1.1 | None | SRR12420678 | Sensitive | lineage2.2.1 | None | SRR29539821 | MDR-TB | lineage2.2.1 | None | SRR14782050 | Sensitive | lineage2.2.1 | None | SRR29053219 | Pre-XDR-TB | lineage2.2.1 | None | ERR13281475 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207101 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303315 | MDR-TB | lineage2.2.1 | None | ERR7339136 | Sensitive | lineage2.2.1 | None | SRR6964542 | MDR-TB | lineage3 | None | SRR12882409 | Sensitive | lineage3.1.1 | None | SRR6964506 | MDR-TB | lineage3 | None | SRR6964549 | MDR-TB | lineage3 | None | SRR1172853 | HR-TB | lineage1.1.2 | None | SRR28170790 | Pre-XDR-TB | lineage2.2.1 | None | SRR6398144 | Other | lineage2.2.1 | ca | SRR6397991 | Other | lineage2.2.1 | ca | ERR7911671 | Sensitive | lineage4.8 | za | SRR20969466 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827718 | Sensitive | lineage2.2.1 | None | SRR15723104 | Sensitive | lineage4.2.2 | None | SRR16100721 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714842 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715175 | Sensitive | lineage4.8 | None | ERR11043700 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050815 | Sensitive | lineage2.2.1 | None | ERR2679254 | Sensitive | lineage4.1.2.1 | None | ERR4830679 | Sensitive | lineage4.8 | dz | ERR4820513 | Sensitive | lineage4.7 | gb | ERR4820514 | Sensitive | lineage4.8 | gb | ERR4822097 | Sensitive | lineage3 | gb | ERR4831912 | HR-TB | lineage2.2.1 | vn | ERR4828544 | Other | lineage2.2.1;lineage2.2.2 | vn | SRR6280250 | Sensitive | lineage2.2.1 | cn | SRR5341372 | HR-TB | lineage4.2.2 | in | SRR5341405 | Pre-XDR-TB | lineage3 | in | SRR5341428 | Pre-XDR-TB | lineage3 | in | SRR1062845 | Pre-XDR-TB | lineage2.2.1 | None | ERR1352340 | MDR-TB | lineage2.2.1 | cn | SRR8217889 | HR-TB | lineage1.1.1 | None | SRR671872 | Sensitive | lineage4.5 | cn | ERR13276111 | HR-TB | lineage2.2.1 | None | SRR25207343 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600454 | Sensitive | lineage4.1.2.1 | None | SRR8651557 | Pre-XDR-TB | lineage4.5 | cn | ERR10762408 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065400 | HR-TB | lineage2.2.1 | vn | ERR4811093 | Sensitive | lineage2.2.1 | cn | ERR4811343 | MDR-TB | lineage2.2.1 | cn | ERR4810466 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811339 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25515784 | HR-TB | lineage4.5 | None | SRR23691424 | Sensitive | lineage2.2.1 | None | SRR10808654 | Other | lineage4.1.2 | None | SRR7069186 | HR-TB | lineage4.3.2 | None | SRR11662296 | MDR-TB | lineage2.1 | None | SRR11972380 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13286069 | RR-TB | lineage2.2.1 | None | ERR4810957 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6831819 | MDR-TB | lineage2.2.1 | None | ERR13262166 | Sensitive | lineage3.1.2.1 | None | SRR14781851 | Sensitive | lineage4.8 | None | ERR108151 | Sensitive | lineage2.2.1.1 | za | SRR15315845 | Sensitive | lineage4.5 | None | ERR5865382 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865379 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485127 | Sensitive | lineage2.2.1 | None | ERR7910924 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043482 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207326 | MDR-TB | lineage2.2.1 | None | ERR11043581 | MDR-TB | lineage4.1.2.1 | None | SRR25827866 | Sensitive | lineage3 | None | ERR4195857 | Sensitive | lineage4.7 | None | SRR1723644 | MDR-TB | lineage2.2.1 | cn | SRR28393830 | Sensitive | lineage4.7 | None | SRR1723501 | Other | lineage2.2.1 | cn | ERR3275562 | MDR-TB | lineage4.8 | nl | ERR3276107 | HR-TB | lineage3 | nl | SRR25207208 | MDR-TB | lineage2.2.1 | None | SRR29385411 | HR-TB | lineage2.2.1 | None | SRR25207386 | MDR-TB | lineage2.2.1 | None | SRR29050779 | Other | lineage2.2.1;lineage2.2.2 | None | ERR13258451 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307612 | MDR-TB | lineage2.2.1 | None | SAMN02414968 | MDR-TB | lineage2.2.1 | se | SRR29267197 | Sensitive | lineage2.2.1 | None | SRR24673550 | HR-TB | lineage2.2.1 | None | ERR4195838 | Sensitive | lineage4.7 | None | ERR3794481 | MDR-TB | lineage2.2.1 | None | ERR13291944 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082417 | HR-TB | lineage2.2.1 | None | ERR6358770 | MDR-TB | lineage4.6.1.2 | None | ERR2307489 | HR-TB | lineage2.2.1 | None | ERR9121679 | Sensitive | lineage4.8 | None | SRR11342681 | Sensitive | lineage4.8 | None | SRR25515195 | Other | lineage2.2.1 | None | ERR13284330 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | DRR130181 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260944 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR18549039 | MDR-TB | lineage2.2.1 | None | SRR29052911 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088494 | Sensitive | lineage4.8 | None | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | ERR2027289 | Sensitive | lineage4.8 | None | ERR15758302 | Other | lineage3 | None | ERR2307496 | MDR-TB | lineage2.2.1 | None | SRR29273609 | MDR-TB | lineage4.8 | None | SRR23938695 | MDR-TB | lineage2.2.1 | None | SRR15723129 | Sensitive | lineage2.2.1 | None | SRR10430343 | MDR-TB | lineage2.2.1 | None | SRR6357008 | RR-TB | lineage4.2.1 | None | ERR552873_ERR552872_ERR552874 | MDR-TB | lineage2.2.1 | None | ERR13265164 | Sensitive | lineage2.2.1 | None | ERR552873 | MDR-TB | lineage2.2.1 | None | ERR13284288 | MDR-TB | lineage4.1.2.1 | None | SRR29053403 | HR-TB | lineage4.1.1.1 | None | SRR671854 | Pre-XDR-TB | lineage2.2.1 | cn | SRR11033666 | Sensitive | lineage4.8 | None | ERR11044396 | Sensitive | lineage4.8 | None | SRR23938634 | MDR-TB | lineage2.2.1 | None | ERR751713 | Sensitive | lineage4.5 | th | SRR15315794 | HR-TB | La1.5;lineage4.5 | None | ERR9121442 | Sensitive | lineage4.7 | None | SRR16370519 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706503 | MDR-TB | lineage2.2.1 | None | ERR2516115 | Sensitive | lineage4.8 | es | ERR4816880 | Sensitive | lineage2.2.1.1 | gb | ERR13266178 | Sensitive | lineage2.2.1 | None | ERR12328147 | Sensitive | lineage2.2.1 | None | ERR181774 | Sensitive | lineage4.3.4.2.1 | mw | SRR6257033 | Pre-XDR-TB | lineage2.2.1 | ru | SRR2101352 | Sensitive | lineage4.9 | None | SRR1062819 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865570 | MDR-TB | lineage4.8 | None | SRR5073578 | Other | lineage2.2.1 | vn | SRR11342680 | Other | lineage4.8 | None | ERR11043852 | Sensitive | lineage4.1.2.1 | None | ERR2517632 | MDR-TB | lineage4.8 | nl | ERR2517497 | MDR-TB | lineage4.8 | nl | ERR4810960 | MDR-TB | lineage2.2.1 | cn | SRR21576553 | Sensitive | lineage2.2.1 | None | ERR4820762 | Sensitive | lineage3 | None | ERR3077984 | Sensitive | lineage3.1.1 | None | ERR5865378 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810834 | Other | lineage2.2.1 | cn | ERR4810831 | MDR-TB | lineage2.2.1 | cn | ERR7737903 | MDR-TB | lineage3 | None | SRR10397207 | MDR-TB | lineage2.2.1 | None | ERR11082095 | Pre-XDR-TB | lineage4.8 | None | SRR1011449 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175300 | HR-TB | lineage1.1.2 | None | ERR11081427 | HR-TB | lineage2.2.1 | None | SRR28044444 | Sensitive | lineage1.1.2 | None | SRR7131123 | Other | lineage4.8 | None | ERR11049899 | Sensitive | lineage4.8 | None | SRR11662135 | MDR-TB | lineage2.2.1 | None | ERR2446347 | MDR-TB | lineage4.8 | nl | ERR3275298 | MDR-TB | lineage4.8 | nl | SRR16370372 | Other | lineage2.2.1 | None | ERR13253330 | XDR-TB | lineage4.5 | None | SRR18715226 | Sensitive | lineage4.8 | None | SAMN02599159 | HR-TB | lineage1.1.2 | in | SRR14782138 | Sensitive | lineage2.2.1 | None | SRR3724822 | Sensitive | lineage3.1.1 | None | SRR29055996 | Other | lineage2.2.1 | None | SRR18213836 | Sensitive | lineage3 | None | DRR130059 | XDR-TB | lineage4.5 | None | ERR278603 | Sensitive | lineage3 | None | SRR1011473 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040519 | MDR-TB | lineage2.2.1 | None | SRR28868598 | Other | lineage1.2.2.2 | None | SRR5152947 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865381 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600598 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR21277255 | HR-TB | La1.5;lineage4.5 | None | SRR16088384 | Pre-XDR-TB | lineage2.2.1 | None | ERR9124897 | HR-TB | lineage2.2.1 | None | SRR12420668 | MDR-TB | lineage2.2.1 | None | SRR7070433 | HR-TB | lineage4.3.2 | None | ERR552872 | MDR-TB | lineage2.2.1 | None | SRR28859845 | HR-TB | lineage2.2.1 | None | SRR6855687 | Sensitive | lineage4.1.1.2 | None | SRR5152952 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662677 | Pre-XDR-TB | lineage2.1 | None | SRR23861779 | Sensitive | lineage4.8 | None | ERR234601 | Pre-XDR-TB | lineage2.2.1 | ru | DRR130180 | Pre-XDR-TB | lineage2.2.1 | None | SRR6896578 | Sensitive | lineage4.9 | None | SRR28239671 | Sensitive | lineage4.8 | None | SRR29126281 | Sensitive | lineage4.1.2.1 | None | SRR29096282 | Sensitive | lineage3 | None | ERR11043833 | Sensitive | lineage4.8 | None | SRR29681462 | Sensitive | lineage4.7 | None | SRR6045485 | Other | lineage4.9 | None | ERR386962 | Sensitive | lineage3 | None | SRR28859778 | Sensitive | lineage1.2.2.2 | None | SRR1165394 | MDR-TB | lineage2.2.1 | None | SRR16058467 | HR-TB | lineage2.2.1 | None | SRR10500314 | Pre-XDR-TB | lineage1.1.2 | None | SRR6785149 | Sensitive | lineage4.2.2 | None | SRR25207364 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02350408 | Pre-XDR-TB | lineage2.2.1 | za | ERR13290203 | Sensitive | lineage4.9 | None | SRR21675696 | Pre-XDR-TB | lineage2.2.1 | None | ERR775807 | Sensitive | lineage4.5 | None | ERR13439860 | HR-TB | lineage2.2.1 | None | ERR5865380 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167079 | MDR-TB | lineage2.2.1 | None | SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None | SAMEA2534973 | MDR-TB | lineage2.2.1 | uz | ERR553208 | MDR-TB | lineage2.2.1 | uz | SRR2100974 | Sensitive | lineage3 | None | ERR1465953 | HR-TB | lineage4.8 | ch | ERR2516036 | Sensitive | lineage4.1.1.2 | za | ERR4831481 | Pre-XDR-TB | lineage1.1.2 | None | SRR6824288 | MDR-TB | lineage2.2.1 | cn | SRR11662298 | Other | lineage2.2.1 | None | ERR1352342 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352341 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352343 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1352344 | Pre-XDR-TB | lineage2.2.1 | cn | SRR20969594 | Other | lineage2.2.1.1 | None | SRR15723124 | Sensitive | lineage2.2.1 | None | SAMN02350432 | Pre-XDR-TB | lineage2.2.1 | za | SRR25827806 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR13290596 | MDR-TB | lineage2.2.1 | None | SRR25515865 | MDR-TB | lineage2.2.1 | None | SRR21690825 | HR-TB | lineage3 | None | ERR4810789 | MDR-TB | lineage2.2.1 | cn | ERR4810924 | MDR-TB | lineage2.2.1 | cn | SRR14801299 | MDR-TB | lineage2.2.1 | None | DRR130076 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810988 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810481 | Pre-XDR-TB | lineage2.2.1 | cn | ERR552874 | MDR-TB | lineage2.2.1 | None | ERR4811361 | MDR-TB | lineage2.2.1 | cn | ERR4830639 | MDR-TB | lineage2.2.1 | tm | SRR25206963 | MDR-TB | lineage2.2.1 | None | SRR28706675 | MDR-TB | lineage2.2.1 | None | ERR2600455 | Sensitive | lineage4.1.2.1 | None | SRR21279329 | HR-TB | lineage2.2.1 | None | SRR1163031 | MDR-TB | lineage2.2.1 | None | SRR10040504 | MDR-TB | lineage2.2.1 | None | ERR10465900 | Sensitive | lineage2.2.1.1 | None | SRR28046012 | RR-TB | lineage2.2.1 | None | ERR13292568 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368905 | Sensitive | lineage2.2.1 | None | SRR18715225 | Sensitive | lineage4.8 | None |
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