Rv0006 - c.996C>T
Drug resistance types
45 Sensitive
0 RR-TB
13 HR-TB
18 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.3 | 62 |
| lineage3 | 2 |
| lineage3.1.3 | 5 |
| lineage2.1 | 6 |
| lineage4.8 | 2 |
| lineage1.1.2 | 1 |
| La3 | 2 |
| lineage1.1.3.3;lineage2.2.1 | 1 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11662612 | Pre-XDR-TB | lineage1.1.3.3 | None | ERR4829353 | Sensitive | lineage3 | None | SRR7069064 | Sensitive | lineage3.1.3 | None | ERR11082711 | Sensitive | lineage1.1.3.3 | None | SRR21732862 | Sensitive | lineage1.1.3.3 | None | SRR23316590 | HR-TB | lineage1.1.3.3 | None | SRR11662400 | MDR-TB | lineage1.1.3.3 | None | SRR29906778 | Sensitive | lineage1.1.3.3 | None | SRR3724968 | Sensitive | lineage1.1.3.3 | None | SRR11828969 | MDR-TB | lineage2.1 | None | SRR11662249 | MDR-TB | lineage1.1.3.3 | None | SRR11662582 | MDR-TB | lineage1.1.3.3 | None | SRR30182325 | Sensitive | lineage1.1.3.3 | None | SRR11662225 | MDR-TB | lineage1.1.3.3 | None | SRR29096720 | HR-TB | lineage1.1.3.3 | None | SRR29126853 | Sensitive | lineage4.8 | None | ERR7902758 | HR-TB | lineage1.1.2 | None | SRR7070066 | HR-TB | lineage1.1.3.3 | None | SRR29440838 | Sensitive | lineage1.1.3.3 | None | ERR1367616 | Sensitive | lineage1.1.3.3 | None | SRR14270080 | MDR-TB | lineage1.1.3.3 | None | ERR751653 | Sensitive | lineage1.1.3.3 | th | ERR752093 | Sensitive | lineage1.1.3.3 | th | SRR5709968 | MDR-TB | lineage1.1.3.3 | th | SRR7517784 | Other | lineage1.1.3.3 | None | SRR7517747 | HR-TB | lineage1.1.3.3 | ch | SRR3105770 | XDR-TB | lineage3 | None | ERR9657184 | Sensitive | lineage1.1.3.3 | None | ERR1367624 | Sensitive | lineage1.1.3.3 | None | SRR21691022 | Sensitive | lineage1.1.3.3 | None | SRR29440716 | HR-TB | lineage1.1.3.3 | None | SRR11715715 | MDR-TB | lineage2.1 | None | SRR23316619 | HR-TB | lineage1.1.3.3 | None | SRR29096967 | HR-TB | lineage1.1.3.3 | None | SRR11662180 | MDR-TB | lineage1.1.3.3 | None | ERR6375137 | Sensitive | La3 | None | SRR11662691 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1 | None | SRR30182464 | Sensitive | lineage1.1.3.3 | None | SRR7069742 | HR-TB | lineage1.1.3.3 | None | ERR751994 | Sensitive | lineage1.1.3.3 | th | ERR775784 | MDR-TB | lineage2.1 | th | ERR752178 | Sensitive | lineage1.1.1;lineage1.1.3.3 | th | ERR751849 | Sensitive | lineage1.1.3.3 | th | ERR752098 | Sensitive | lineage1.1.3.3 | th | ERR718370 | Sensitive | lineage1.1.3.3 | th | ERR775754 | Sensitive | lineage1.1.3.3 | th | ERR751688 | Sensitive | lineage1.1.3.3 | th | ERR752022 | Sensitive | lineage1.1.3.3 | th | ERR4829651 | Sensitive | lineage4.8 | None | ERR551084 | Sensitive | lineage1.1.3.3 | de | ERR718343 | Sensitive | lineage1.1.3.3 | th | ERR2514053 | HR-TB | lineage1.1.3.3 | gb | ERR4810826 | Sensitive | lineage2.2.1 | cn | SRR6045696 | Sensitive | lineage3.1.3 | None | ERR3276009 | Sensitive | lineage1.1.3.3 | nl | ERR13290208 | Sensitive | lineage3.1.3 | None | SRR30182369 | Sensitive | lineage1.1.3.3 | None | SRR11828970 | MDR-TB | lineage2.1 | None | SRR23316628 | HR-TB | lineage1.1.3.3 | None | SRR29096463 | Sensitive | lineage1.1.3.3 | None | ERR11082150 | HR-TB | lineage1.1.3.3 | None | SRR11662439 | MDR-TB | lineage2.1 | None | SRR29055379 | Sensitive | lineage1.1.3.3 | None | SRR11662484 | MDR-TB | lineage1.1.3.3 | None | SRR23316608 | HR-TB | lineage1.1.3.3 | None | SRR26112204 | Sensitive | lineage1.1.3.3 | None | SRR26112108 | Sensitive | lineage1.1.3.3 | None | ERR13289679 | Sensitive | lineage3.1.3 | None | ERR6375138 | Other | La3 | None | ERR751907 | Other | lineage1.1.3.3 | th | ERR751754 | Sensitive | lineage1.1.3.3 | th | ERR752290 | Sensitive | lineage1.1.3.3 | th | ERR752234 | MDR-TB | lineage2.1 | th | ERR718562 | Other | lineage1.1.3.3 | th | ERR775765 | Sensitive | lineage1.1.3.3 | th | ERR775795 | MDR-TB | lineage1.1.3.3 | th | ERR751669 | Sensitive | lineage1.1.3.3 | th | SRR10185951 | MDR-TB | lineage1.1.3.3 | None | SRR5709920 | MDR-TB | lineage1.1.3.3 | th | SRR6045947 | Sensitive | lineage3.1.3 | gb | SRR29096803 | Sensitive | lineage1.1.3.3 | None | SRR11662491 | MDR-TB | lineage1.1.3.3 | None | SRR26112483 | Sensitive | lineage1.1.3.3 | None |
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