Rv0006 - c.321C>T


Drug resistance types
30 Sensitive 7 RR-TB 65 HR-TB 34 MDR-TB 4 Pre-XDR-TB 3 XDR-TB 143 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
26
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.1;lineage4.9;lineage6.3 6
lineage2.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 19
lineage4.9 65
M.canetti;lineage4.9 5
La3;lineage4.9 7
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.4.2 2
lineage4.1.1.1 1
lineage1.1 1
lineage4.4.1.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.7;M.canetti;lineage4.9 3
lineage2.2.1 11
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.2.1 10
lineage4.7 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 4
lineage4.8 5
lineage4 4
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1 2
lineage4.1.3 2
lineage6.3.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 8
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage6 1
lineage2.2.1.2 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 1
lineage4.1.2 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;lineage4.9 2
lineage4.8;lineage4.9 2
lineage2.1;lineage4.9 13
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage4 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
lineage4.3.4.2.1 2
La1.8.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.1 1
lineage4.9;lineage9 1
lineage5.2 2
lineage1.1.1 1
lineage4.3.2.1 1
lineage4.8.1 1
lineage3.1 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
M.canetti;lineage2.2 2
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1;lineage4 1
lineage3 1
lineage6.1.3 2
lineage4.4.1.1 2
lineage4.2.1.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage3 1
lineage2.2.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
spoligotype Counts
spoligotype Count
None 286
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR7496517 Other None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR176549 Other lineage4.3.4.2 None
ERR176793 Other lineage4.1.1.1 None
ERR3077978 Other lineage1.1 None
SRR3675235 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4800341 Other None
ERR4810624 HR-TB lineage2.2.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR13265833 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR4811142 RR-TB None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other None
ERR4815752 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819932 Sensitive lineage4.7 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR9786569 Other lineage4.8 None
SRR6511621 Sensitive lineage4.9 None
ERR9786525 Other lineage4 None
SRR6044942 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787139 Other lineage6.3.1 None
SRR3675236 Other None
ERR3273109 HR-TB lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4817893 Other lineage4.8 None
ERR9117721 HR-TB None
ERR9787165 Other lineage6 None
SRR18549032 HR-TB lineage2.2.1.2 None
ERR6866639 Other lineage4.9 None
ERR4816585 Other lineage2.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117709 Other None
SRR7496509 Other None
SRR9971112 Other lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046066 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR5341330 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR4816999 Other None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR3797023 HR-TB La1.8.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4811105 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR124636 Sensitive lineage4.9 None
ERR6358991 HR-TB None
ERR6358755 Other lineage4.6.1 None
ERR4811075 Other None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.2.1 None
SRR29604869 Sensitive lineage1.1.1 None
ERR3283044 Other lineage4 None
ERR8976043 HR-TB lineage2.2 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR176751 Other lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR28351442 HR-TB lineage3.1 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786604 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323062 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR137286 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR29096795 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4815604 Other None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1791747 Other La1.8.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819322 Other lineage1.1;lineage4 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR6789626 Other None
ERR4797588 MDR-TB lineage3 None
SRR5341461 HR-TB lineage4.9 None
ERR9786526 Other lineage4.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR29017461 Other La3;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9787256 Other lineage6.1.3 None
SRR1165699 Other lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR1034634 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323085 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR3797070 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR2514692 Other None
ERR9787197 Other None
ERR234659 Other None
ERR4817060 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6044815 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR323066 Sensitive lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6046540 Other lineage2.1;lineage4.9 None