Rv0006 - c.312G>A
Drug resistance types
38 Sensitive
1 RR-TB
18 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 50 |
| lineage2.2.2 | 17 |
| La3;lineage4.9 | 6 |
| lineage1.1.2 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1 | 6 |
| lineage4.8;lineage4.9 | 2 |
| lineage3 | 1 |
| lineage6.1.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| La1.8.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 2 |
| lineage3.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage4 | 1 |
| 1 | |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6511621 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR26399954 | Other | lineage2.2.2 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR5073818 | MDR-TB | lineage2.2.2 | vn | ERR502511 | Sensitive | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR13265833 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR2660539 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR552913 | Sensitive | lineage2.2.2 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR4831756 | MDR-TB | lineage2.2.2 | vn | ERR4831738 | MDR-TB | lineage2.2.2 | vn | ERR4831757 | MDR-TB | lineage2.2.2 | vn | ERR4830201 | Other | lineage2.2.2 | vn | ERR4828239 | HR-TB | lineage2.2.2 | vn | ERR551086 | Sensitive | lineage2.2.2 | None | ERR552755 | Sensitive | lineage2.2.2 | None | SRR6046878 | Other | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR5067419 | HR-TB | lineage2.2.2 | vn | ERR736872 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR25514911 | Sensitive | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR552912 | Sensitive | lineage2.2.2 | None | ERR2446566 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR13292404 | Sensitive | lineage2.2.1 | None | SRR26399520 | HR-TB | lineage2.2.2 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR9119301 | Other | lineage2.2.2 | None | SRR29051072 | HR-TB | lineage2.2.2 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SAMEA2534994 | Sensitive | lineage2.2.2 | vn | ERR4796254 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063896 | Sensitive | None | SRR26399379 | Sensitive | lineage2.2.2 | None | SRR6046210 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6045053 | Other | lineage4 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None |
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