Rv0006 - c.1962C>T
Drug resistance types
20 Sensitive
1 RR-TB
8 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| lineage4.6.2.2 | 2 |
| lineage4.8 | 10 |
| La1.7;lineage4.9 | 5 |
| lineage4.5 | 1 |
| La2;lineage2.2 | 1 |
| lineage4 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769521 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR176751 | Other | lineage4.9 | None | ERR13292564 | Sensitive | lineage4.8 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3743387 | Sensitive | lineage4.8 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR14782456 | Sensitive | lineage4.8 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR14782754 | Sensitive | lineage4.8 | None | SRR29231425 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR10380181 | Sensitive | lineage4.8 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR14782212 | Other | lineage4.2.1.1;lineage4.8 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR7755740 | Sensitive | lineage4.8 | None | SRR6046593 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR10380220 | Sensitive | lineage4.8 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR7646031 | Sensitive | lineage4.8 | None | ERR4769452 | Other | lineage4.9 | None | SRR14801466 | Sensitive | lineage4.8 | None | ERR2514692 | Other | None | SRR10380208 | Sensitive | lineage4.8 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None |
|---|
