Rv0006 - c.1362C>T
Drug resistance types
40 Sensitive
1 RR-TB
13 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| lineage4 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 24 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.2 | 1 |
| M.canetti;lineage1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage3 | 1 |
| 1 | |
| lineage2.2.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045892 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR3957942 | Sensitive | lineage4.3.4.2 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR6358979 | Other | lineage4.9 | None | ERR3957921 | Sensitive | lineage4.3.4.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR3957941 | Sensitive | lineage4.3.4.2 | None | ERR3957950 | Sensitive | lineage4.3.4.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR10219863 | Sensitive | lineage4.3.4.2 | None | ERR275193 | Sensitive | lineage4.3.4.2 | pt | ERR3957934 | Sensitive | lineage4.3.4.2 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3957940 | Sensitive | lineage4.3.4.2 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR12745254 | Sensitive | lineage4.3.4.2 | None | ERR1193772 | Sensitive | lineage4.3.4.2 | pt | ERR11641183 | Sensitive | lineage4.3.4.2 | None | SRR28859763 | Sensitive | lineage4.5 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR13591353 | Sensitive | lineage4.3.4.2 | None | ERR3957947 | Sensitive | lineage4.3.4.2 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4798099 | Other | lineage4.9 | None | ERR3957949 | Sensitive | lineage4.3.4.2 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR11641185 | Sensitive | lineage4.3.4.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR13591366 | Sensitive | lineage4.3.4.2 | None | ERR3957946 | Sensitive | lineage4.3.4.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR3957943 | Sensitive | lineage4.3.4.2 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR7764331 | Sensitive | lineage4.3.4.2 | None | ERR3957926 | Sensitive | lineage4.3.4.2 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR10219862 | Sensitive | lineage4.3.4.2 | None | ERR3957929 | Sensitive | lineage4.3.4.2 | None | SRR28351347 | Other | lineage3 | None | ERR1063896 | Sensitive | None | ERR736856 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR7764402 | Sensitive | lineage4.3.4.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR736834 | Sensitive | lineage4.9 | None |
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