Rv0006 - c.1038A>C
Drug resistance types
11 Sensitive
2 RR-TB
27 HR-TB
7 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage2.2.1.2 | 3 |
| La1.2 | 1 |
| lineage4.9 | 37 |
| La1.7;lineage4.9 | 4 |
| 3 | |
| La1;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2 | 2 |
| lineage4 | 3 |
| lineage4.8 | 1 |
| lineage4.3.4.2.1 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1 | 7 |
| lineage3 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.8.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR23961549 | Other | La1.2 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR212001 | HR-TB | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4819241 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR9786525 | Other | lineage4 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR26331611 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR1181289 | Other | lineage2.2.1 | None | ERR6866807 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR29096943 | Sensitive | lineage3.1.2.1 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR12006550 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None |
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