Rv0006 - c.-74C>T
Drug resistance types
4 Sensitive
0 RR-TB
7 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 6 |
| lineage4.3.4.1 | 2 |
| lineage2.2.1 | 4 |
| lineage4.6.1.1 | 1 |
| 4 | |
| lineage4.1.2.1 | 3 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1;lineage4 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.1.3 | 2 |
| lineage2.1 | 1 |
| La2 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage5.1.4 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| lineage4.9 | 3 |
| lineage3 | 2 |
| lineage4.9;lineage6.3 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR28409486 | Other | lineage4.3.4.1 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR18213713 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29681371 | MDR-TB | lineage2.2.1 | None | SRR24256222 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR702406 | Other | lineage2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR13888774 | Sensitive | La2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR439973 | MDR-TB | lineage5.1.4 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9787197 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR439949 | Sensitive | lineage5.1.4 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR21710916 | Sensitive | lineage4.3.4.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR13888784 | Sensitive | La2 | None | ERR4800341 | Other | lineage3 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None |
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