Rv0006 - c.-401G>C
Drug resistance types
1 Sensitive
1 RR-TB
12 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage6.3 | 2 |
| La3 | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.9 | 9 |
| lineage4.1.2.1 | 4 |
| 17 | |
| lineage4.9;lineage6.3 | 5 |
| lineage2.2.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 3 |
| lineage4 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.1 | 1 |
| lineage2.2.1 | 4 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| lineage6 | 1 |
| lineage2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.3.3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage5.2 | 2 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | ERR9787197 | Other | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR2027263 | Other | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9117721 | HR-TB | None | ERR9787165 | Other | lineage6 | None | SRR1165699 | Other | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR7496509 | Other | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR1184381 | MDR-TB | None | ERR234659 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797069 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR12015083 | Other | lineage4.8 | None | SRR6045526 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4797201 | Other | None | ERR4800341 | Other | None | ERR4811105 | HR-TB | None | SRR6789626 | Other | None | ERR4810741 | HR-TB | None | ERR4811142 | RR-TB | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR1196546 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None |
|---|
