EBG00000313339 - n.771C>T
Drug resistance types
102 Sensitive
10 RR-TB
10 HR-TB
56 MDR-TB
15 Pre-XDR-TB
5 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 4 |
| lineage4.3.3 | 23 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 57 |
| 2 | |
| lineage2.2.2 | 8 |
| lineage1.2.1.2 | 21 |
| La1.7.1 | 3 |
| lineage1.2.1.2.1 | 6 |
| lineage4.3.4.2.1 | 12 |
| lineage4.1.2 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.1.2 | 10 |
| lineage4.2.1 | 3 |
| lineage4.1.2.1 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage3.1.1 | 14 |
| lineage4.3.4.2 | 2 |
| lineage4.8 | 10 |
| lineage2.2.1.1 | 2 |
| lineage4.9.1 | 2 |
| lineage4.9 | 4 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage3 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.1;lineage4.3.3 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR12544262 | RR-TB | lineage4.2.1.1 | None | ERR12549652 | Sensitive | lineage4.3.3 | None | SRR29093797 | Sensitive | lineage4.4.1.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR29096518 | Sensitive | None | ERR5987454 | MDR-TB | lineage2.2.2 | None | SRR12882437 | Other | lineage1.2.1.2 | None | ERR7801308 | Sensitive | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR9119853 | MDR-TB | lineage2.2.1 | None | ERR6336732 | Sensitive | lineage1.2.1.2.1 | None | ERR7801310 | Sensitive | lineage4.3.4.2.1 | None | ERR9119706 | Sensitive | lineage4.1.2 | None | ERR7801293 | Sensitive | lineage4.3.4.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR23961539 | Other | La1.7.1 | None | SRR12882349 | Sensitive | lineage1.1.2 | None | ERR12544446 | Sensitive | lineage4.2.1 | None | ERR7801323 | Sensitive | lineage4.1.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR9119747 | MDR-TB | lineage2.2.1 | None | ERR5866510 | MDR-TB | lineage4.3.3 | None | SRR12882096 | Sensitive | lineage1.2.1.2 | None | SRR12882094 | Sensitive | lineage1.2.1.2 | None | SRR12882337 | Sensitive | lineage3.1.1 | None | ERR12549782 | Sensitive | lineage4.3.3 | None | ERR10869436 | MDR-TB | lineage4.3.3 | None | ERR7801294 | Sensitive | lineage4.3.4.2 | None | ERR12549780 | Sensitive | lineage4.8 | None | SRR29096815 | Sensitive | lineage2.2.1.1 | None | SRR12882681 | Sensitive | lineage1.1.2 | None | ERR10867591 | MDR-TB | lineage4.2.1.1 | None | ERR11243554 | MDR-TB | lineage2.2.1 | None | ERR7801300 | HR-TB | lineage4.9.1 | None | ERR7801295 | Sensitive | lineage4.9.1 | None | SRR12882104 | Sensitive | lineage1.2.1.2 | None | ERR14748650 | XDR-TB | lineage4.9 | None | ERR12916919 | XDR-TB | lineage2.2.1 | None | ERR12916908 | Pre-XDR-TB | lineage2.2.1 | None | ERR12916921 | Pre-XDR-TB | lineage2.2.1 | None | ERR7801309 | Sensitive | lineage4.3.4.2.1 | None | SRR12882440 | Sensitive | lineage1.2.1.2 | None | SRR12882322 | Sensitive | lineage3.1.1 | None | ERR12545827 | RR-TB | lineage2.2.1 | None | ERR7801318 | Sensitive | lineage4.4.1.1 | None | ERR5987432 | MDR-TB | lineage2.2.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR12882328 | Sensitive | lineage3.1.1 | None | ERR7801302 | Sensitive | lineage4.3.4.2.1 | None | SRR12882092 | Sensitive | lineage1.2.1.2 | None | ERR12545823 | RR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR5987278 | MDR-TB | lineage4.1.2 | None | ERR12549777 | RR-TB | lineage4.8 | None | ERR5866472 | MDR-TB | lineage2.2.1 | None | ERR12544299 | Other | lineage2.2.1 | None | SRR12882538 | Sensitive | lineage1.1.2 | None | ERR9119772 | MDR-TB | lineage2.2.1 | None | ERR11243579 | MDR-TB | lineage2.2.1 | None | ERR7801311 | Sensitive | lineage4.3.4.2.1 | None | SRR12882113 | Sensitive | lineage1.2.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12882661 | Sensitive | lineage1.1.2 | None | ERR7801287 | Sensitive | lineage4.3.3 | None | SRR12882329 | Sensitive | lineage3.1.1 | None | SRR12882417 | Sensitive | lineage3.1.1 | None | SRR12882418 | Sensitive | lineage3.1.1 | None | ERR10877870 | Pre-XDR-TB | lineage4.3.3 | None | ERR10877863 | MDR-TB | lineage2.2.1 | None | SRR12882544 | Sensitive | lineage1.1.2 | None | SRR29096266 | Pre-XDR-TB | lineage2.2.1 | None | ERR7801292 | Sensitive | lineage4.3.4.2.1 | None | ERR10877856 | MDR-TB | lineage2.2.1 | None | ERR12544389 | Sensitive | lineage2.2.1 | None | ERR12544261 | Sensitive | lineage4.3.3 | None | SRR12882093 | Sensitive | lineage1.2.1.2 | None | SRR12882662 | Sensitive | lineage1.1.2 | None | ERR10877879 | MDR-TB | lineage2.2.1 | None | ERR10877880 | MDR-TB | lineage4.3.3 | None | ERR9119792 | MDR-TB | lineage2.2.2 | None | ERR6336763 | Sensitive | lineage1.2.1.2.1 | None | ERR11049670 | Sensitive | lineage4.8 | None | SRR12212959 | HR-TB | lineage4.9 | None | ERR12544380 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR12882350 | Sensitive | lineage3.1.1 | None | ERR7801312 | Sensitive | lineage2.2.1 | None | ERR2653040 | Other | lineage4.1.1.1 | None | ERR12544390 | RR-TB | lineage4.2.1.1 | None | SRR12882111 | Other | lineage1.2.1.2 | None | SRR12882118 | HR-TB | lineage1.2.1.2 | None | SRR12882340 | Sensitive | lineage3.1.1 | None | SRR12882100 | Sensitive | lineage1.2.1.2 | None | SRR12882431 | Sensitive | lineage1.2.1.2 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | ERR10869162 | MDR-TB | lineage4.3.3 | None | ERR10877862 | MDR-TB | lineage4.8 | None | SRR12882463 | Sensitive | lineage1.1.2 | None | ERR12544388 | Sensitive | lineage4.8 | None | SRR21277046 | Sensitive | lineage2.2.1 | None | ERR7801304 | Sensitive | lineage4.3.4.2.1 | None | ERR5987460 | Sensitive | lineage4.1.2 | None | ERR10869438 | MDR-TB | lineage2.2.1 | None | SRR12882442 | Sensitive | lineage1.2.1.2 | None | SRR12882344 | Sensitive | lineage3.1.1 | None | ERR7801316 | Sensitive | lineage2.2.1 | None | ERR6336734 | Sensitive | lineage1.2.1.2.1 | None | ERR9119764 | RR-TB | lineage2.2.1 | None | SRR12882481 | MDR-TB | lineage1.2.1.2 | None | SRR12882666 | RR-TB | lineage3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR9613549 | Sensitive | lineage4.1.1.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR9119701 | MDR-TB | lineage4.1.2 | None | ERR7801313 | Other | lineage4.3.4.2.1 | None | ERR11243558 | MDR-TB | lineage2.2.1 | None | SRR12882334 | Sensitive | lineage3.1.1 | None | SRR12882604 | Sensitive | lineage1.1.2 | None | ERR10868931 | MDR-TB | lineage2.2.1 | None | SRR12882482 | Sensitive | lineage1.2.1.2.1 | None | SRR12882200 | HR-TB | lineage1.2.1.2 | None | SRR12882323 | Sensitive | lineage1.2.2.2 | None | SRR12882114 | Sensitive | lineage1.2.1.2 | None | ERR12545821 | Sensitive | lineage4.3.3 | None | ERR12544386 | Sensitive | lineage4.2.1 | None | ERR11243570 | MDR-TB | lineage2.2.1 | None | ERR6362271 | MDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR12544297 | Sensitive | lineage4.3.3 | None | ERR7801306 | Sensitive | lineage2.2.1 | None | ERR11243562 | MDR-TB | lineage2.2.1 | None | ERR2653117 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR12882116 | Sensitive | lineage1.2.1.2 | None | SRR12882429 | Sensitive | lineage1.2.1.2 | None | SRR12882605 | Sensitive | lineage3.1.1 | None | SRR12882195 | Sensitive | lineage1.2.1.2 | None | ERR5987257 | MDR-TB | lineage2.2.2 | None | ERR7801301 | Sensitive | lineage4.3.4.2.1 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | ERR7801315 | Sensitive | lineage2.2.1 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR5987238 | RR-TB | lineage2.2.1 | None | SRR29093591 | Sensitive | lineage2.2.1.1 | None | ERR9119697 | MDR-TB | lineage2.2.2 | None | ERR6362028 | MDR-TB | lineage2.2.1 | None | SRR12882196 | Sensitive | lineage1.2.1.2 | None | SRR12882428 | Sensitive | lineage1.2.1.2.1 | None | SRR12882664 | Sensitive | lineage3 | None | SRR12882333 | Other | lineage3 | None | SRR12882673 | Sensitive | lineage1.1.2 | None | SRR21277209 | Sensitive | lineage2.2.1 | None | ERR10877866 | MDR-TB | lineage4.3.3 | None | ERR12916907 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882343 | Sensitive | lineage1.1.3.2 | None | ERR10877891 | MDR-TB | lineage4.3.3 | None | ERR11243555 | MDR-TB | lineage2.2.1 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR10868625 | Pre-XDR-TB | lineage4.3.3 | None | ERR6362460 | MDR-TB | lineage2.2.1 | None | ERR7801320 | Sensitive | lineage4.3.4.2.1 | None | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093839 | Sensitive | lineage2.2.1 | None | ERR12916909 | XDR-TB | lineage2.2.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR11243572 | MDR-TB | lineage4.8 | None | ERR10877865 | MDR-TB | lineage2.2.1 | None | SRR3675222 | Other | La1.7 | None | ERR11243569 | MDR-TB | lineage2.2.1 | None | DRR305355 | Other | La1.2.BCG | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR12916927 | XDR-TB | lineage4.3.3 | None | ERR10868818 | Pre-XDR-TB | lineage2.2.1 | None | ERR10877886 | MDR-TB | lineage2.2.1 | None | ERR12545825 | Sensitive | lineage4.2.1.1 | None | SRR28045084 | Sensitive | lineage1.1.2 | None | ERR11243571 | MDR-TB | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR12882670 | Sensitive | lineage3.1.1 | None | ERR9119759 | MDR-TB | lineage2.2.2 | None | ERR10869097 | MDR-TB | lineage4.3.3 | None | SRR12882339 | Sensitive | lineage3.1.1 | None | SRR15315806 | Sensitive | lineage2.2.1 | None | SRR12882098 | Sensitive | lineage1.2.1.2 | None | ERR11243556 | MDR-TB | lineage2.2.1 | None | ERR11243565 | Pre-XDR-TB | lineage2.2.1 | None | ERR2120283 | MDR-TB | lineage4.6.5 | None | ERR12549784 | Sensitive | lineage4.2.1 | None | ERR11243561 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882477 | Sensitive | lineage1.2.1.2.1 | None | ERR11243552 | MDR-TB | lineage2.2.1 | None | ERR10877888 | MDR-TB | lineage4.3.3 | None | ERR10869170 | Pre-XDR-TB | lineage4.3.3 | None | ERR10877882 | MDR-TB | lineage4.2.1;lineage4.3.3 | None | ERR10877896 | Pre-XDR-TB | lineage4.3.3 | None | ERR11243553 | MDR-TB | lineage2.2.1 | None | ERR12544298 | RR-TB | lineage4.8 | None | ERR5987314 | MDR-TB | lineage2.2.2 | None | SRR28673989 | Other | La1.7.1 | None | SRR29094079 | MDR-TB | lineage2.2.1 | None | ERR12549577 | Sensitive | lineage4.3.3 | None | SRR29385326 | Sensitive | lineage4.1.2.1 | None | SRR28239745 | Sensitive | lineage4.3.3 | None | ERR10867699 | MDR-TB | lineage2.2.1 | None | ERR12549711 | Sensitive | lineage4.8 | None | ERR12916911 | Pre-XDR-TB | lineage2.2.1 | None | ERR10869501 | MDR-TB | lineage4.3.3 | None | SRR12882419 | Sensitive | lineage3.1.1 | None | ERR7801289 | Sensitive | lineage4.3.4.2.1 | None | ERR12546193 | Sensitive | lineage4.3.3;lineage4.8 | None | ERR12544387 | Sensitive | lineage4.3.3 | None | ERR11243568 | MDR-TB | lineage2.2.1 | None | SRR21277028 | Sensitive | lineage2.2.1 | None | ERR10867702 | MDR-TB | lineage2.2.1 | None | ERR9119777 | MDR-TB | lineage2.2.2 | None | ERR12544442 | RR-TB | lineage4.8 | None |
|---|
