EBG00000313339 - n.3053dupC
Drug resistance types
16 Sensitive
1 RR-TB
7 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4.4.1.1 | 3 |
| lineage2.2.1 | 5 |
| lineage4.3 | 1 |
| lineage4.1.2.1 | 2 |
| La1.5 | 6 |
| lineage4.8 | 3 |
| La1.1 | 3 |
| La1.1;lineage3 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2;lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4037751 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | ERR13193800 | Other | lineage2.2.1 | None | SRR27107258 | Pre-XDR-TB | lineage4.3 | None | SRR6832338 | Sensitive | lineage4.1.2.1 | None | ERR2815559 | HR-TB | La1.5 | None | ERR4827516 | Sensitive | lineage4.8 | None | SRR6152728 | Other | lineage2.2.1 | ca | ERR181980 | Sensitive | La1.1 | mw | ERR161071 | Sensitive | La1.1;lineage3 | mw | ERR11068230 | HR-TB | La1.5 | None | SRR18911980 | Sensitive | lineage2.2.2 | None | SRR4037750 | Sensitive | lineage2.2;lineage4.4.1.1 | za | SRR6824360 | MDR-TB | lineage4.5 | cn | ERR11049513 | Sensitive | lineage4.8 | None | ERR2212120 | HR-TB | La1.5 | None | SRR6832648 | Sensitive | lineage4.1.2.1 | None | ERR10112416 | HR-TB | lineage2.2.1.1 | None | SRR4037752 | RR-TB | lineage2.2.1;lineage4.4.1.1 | za | SRR4037761 | Sensitive | lineage2.2.1;lineage4.4.1.1 | za | SRR28239442 | HR-TB | La1.5 | None | ERR11044311 | HR-TB | La1.5 | None | ERR161044 | Sensitive | La1.1 | mw | ERR13292385 | Sensitive | lineage2.2.2 | None | ERR212091 | Sensitive | La1.1 | mw | ERR550643 | Sensitive | lineage2.2.1 | None | ERR550644 | Sensitive | lineage2.2.1 | None | SAMEA2533363 | Sensitive | lineage2.2.1 | de | SRR6797377 | Other | lineage4.8 | None | ERR11068156 | HR-TB | La1.5 | None |
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