EBG00000313339 - n.2550T>C
Drug resistance types
10 Sensitive
12 RR-TB
5 HR-TB
13 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 11 |
| lineage2.2.1 | 17 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.3.2 | 1 |
| lineage3 | 3 |
| lineage4.1 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.8.1 | 1 |
| lineage4.9 | 28 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.3.3 | 9 |
| lineage5 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR978767 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2515032 | Other | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR7069839 | Other | lineage4.8 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5818389 | Other | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4820151 | Other | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR5818446 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR5818432 | MDR-TB | lineage4.9 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4816967 | Other | lineage5 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5818408 | Other | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR5818452 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5818388 | Other | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR5818459 | Other | lineage4.9 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR10796565 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR5818400 | Other | lineage4.9 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR2229234 | Sensitive | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818434 | Sensitive | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR5818469 | Other | lineage4.9 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR13285329 | Sensitive | lineage4.4.1.1 | None | SRR5818411 | RR-TB | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR21689797 | Sensitive | lineage4.4.1.1 | None | SRR5818426 | Other | lineage4.9 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None |
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