EBG00000313339 - n.230T>A
Drug resistance types
37 Sensitive
2 RR-TB
21 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 48 |
| lineage2.2.1 | 15 |
| lineage4.2.1.1 | 1 |
| La3;lineage4.9 | 6 |
| lineage4.8 | 1 |
| lineage2.2.1.1 | 4 |
| La1;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119823 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1202728 | Other | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1208327 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1202570 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1208211 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1208196 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1202388 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR1202451 | Sensitive | lineage4.9 | None | SRR1202706 | Other | lineage4.9 | None | SRR1208575 | Sensitive | lineage4.9 | None | SRR1202702 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR1208659 | Other | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1208369 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR28119843 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1208264 | Sensitive | lineage4.9 | None | ERR1815538 | Other | La1.7.1 | None | SRR1202520 | Sensitive | lineage4.9 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1202538 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1208774 | Sensitive | lineage4.9 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1208626 | Sensitive | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1208886 | Other | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR6045158 | Other | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1238558 | Other | lineage4.9 | None | SRR1208539 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1208653 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1202383 | Sensitive | lineage4.9 | None | SRR1208556 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None |
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