EBG00000313339 - n.2099T>C
Drug resistance types
14 Sensitive
26 RR-TB
28 HR-TB
36 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
109 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 34 |
| lineage4.3.3 | 12 |
| lineage4.8 | 19 |
| lineage2.2.2 | 5 |
| lineage4.4.1.1 | 8 |
| lineage4.9 | 27 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.2.2.2 | 5 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 12 |
| lineage4.3 | 1 |
| lineage4.6.5 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage3 | 14 |
| lineage4.1.1.1 | 6 |
| lineage4.6.2.2 | 3 |
| lineage6.1.2 | 1 |
| La1.6 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.1.3 | 5 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2 | 1 |
| lineage1.1.3.1 | 2 |
| La2;lineage2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3.1.1 | 3 |
| lineage4.1.2 | 3 |
| lineage4.3.2.1 | 4 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4 | 1 |
| lineage4.5 | 2 |
| lineage4.3.1 | 1 |
| lineage3;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| 1 | |
| lineage4.1;lineage4.9 | 1 |
| lineage4.8.1 | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.8.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 223 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR6046848 | Other | lineage4.6.5 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180446 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR4821773 | Other | La1.6 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4821325 | Other | lineage3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR867574 | Other | lineage4.9 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR10796623 | Other | lineage4.1.1.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR7069030 | Other | lineage3 | None | SRR7069137 | Other | lineage4.8 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796580 | Other | lineage4 | None | SRR7069319 | Other | lineage4.5 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4817060 | Other | None | ERR3283008 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR10796595 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR9117788 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7069648 | Other | lineage4.6.2.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR1181256 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR7069097 | Other | lineage3.1.2.1 | None | ERR6866807 | Other | lineage4.9 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR6044936 | Other | lineage4.6 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR7070223 | HR-TB | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR387051 | Other | lineage4.9 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR4818180 | Other | lineage4.8 | gb | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None |
|---|
