EBG00000313339 - n.1980T>G
Drug resistance types
21 Sensitive
2 RR-TB
26 HR-TB
6 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 2 |
| lineage4.9 | 43 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7 | 1 |
| 1 | |
| La1.8.1 | 5 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 9 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.8 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4 | 2 |
| M.canetti;lineage1 | 1 |
| La1.6 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675222 | Other | La1.7 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR7240476 | Other | La1.8.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR16156817 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7240033 | Other | La1.8.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None |
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