EBG00000313339 - n.1962C>T
Drug resistance types
4 Sensitive
0 RR-TB
16 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 19 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.8.1 | 3 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR6198317 | Other | La1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR7240476 | Other | La1.8.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675222 | Other | La1.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR3283040 | HR-TB | lineage4.9 | None |
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