EBG00000313325 - n.840G>A
Drug resistance types
5 Sensitive
4 RR-TB
3 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage4.9 | 9 |
| lineage4.8 | 5 |
| lineage4.1.2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage1.2.1.2 | 1 |
| La1.2 | 1 |
| lineage3 | 1 |
| lineage4.7 | 1 |
| lineage2.2.2 | 2 |
| lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.2 | 1 |
| La1.3 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971114 | Other | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR9121505 | Sensitive | lineage4.8 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4769493 | Other | lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4769418 | Other | La1.2 | None | SRR1173281 | Other | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5908124 | Other | lineage4.8 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4769495 | Other | La1.3 | None | SRR16157123 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR4195412 | Sensitive | lineage4.8 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None |
|---|
