EBG00000313325 - n.829T>C
Drug resistance types
4 Sensitive
4 RR-TB
4 HR-TB
11 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 2 |
| lineage2.2.1 | 12 |
| lineage4.1.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.9 | 8 |
| lineage4.8 | 4 |
| lineage4 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4033549 | Other | lineage2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR228208 | Sensitive | lineage4.5 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR16157123 | Other | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1180446 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR2229148 | Other | lineage4.8 | dk | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None |
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